Halobacterium hubeiense: Hhub_1958
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Entry
Hhub_1958 CDS
T04202
Name
(GenBank) cryptochrome/photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhb03400
]
Hhub_1958
Enzymes [BR:
hhb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Hhub_1958
DNA repair and recombination proteins [BR:
hhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Hhub_1958
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
CQH53382
UniProt:
A0A0U5HSY8
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All DBs
Position
I:881755..883269
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AA seq
504 aa
AA seq
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MTAVWVLGDQLSRERGPLADDPDRVLFVEASEFARRRRYHPQKLTLVFAAMRNLADDLRA
DGVDVVYERADSFAAGLDAYFDAHPGDELVVQRPATHGAADRLRELVTERGGSLRVVENE
QFLCSPDDFDEWADDRDGDAYSHEAFYRWMRRETGYLLTDGDPEGGEWNYDEQNRETPPD
DYESAPLPEFEYGERVPEVREWVAAEFDTWGDPDGFGWPVARQHAERALDDFLDHRLAEF
GPYEDAMLADDWHLDHSLLSAALNVGLLGPREVVEAAISAYREREDIPLHSVEGFVRQVV
GWREFVRHVYRREMPELADANQLDQTRELPPLYWDPDATEMACVGTAVGRVHDRGYTHHI
ERLMVLSNFALLYGTSPQALNEWFYGGFVDAFHWVVTPNVVGMGSFGTAAFTTKPYAASA
NYVDRMSDFCAGCRYDPDSTTGADACPFNSLYWDFLAAREDDLRANHRMGLVYSHLDDKR
DAGDLAAIRERADAVRSRAASGDL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgtctgggtgctcggcgaccagctctcccgggagcgcggcccgctcgcggac
gaccccgaccgggtgctgttcgtggaggccagcgagttcgcgcggcggcgccgctaccac
ccccagaagctcacgctcgtgttcgccgcgatgcgcaacctcgccgacgacctgcgcgcc
gacggcgtggacgtcgtctacgagcgcgcggactccttcgcggcggggctggacgcgtac
ttcgacgcccaccccggcgacgaactggtggtgcagcggcccgcgacccacggcgccgcc
gaccggctccgcgaactcgtgaccgaacggggcgggagcctgcgcgtcgtggagaacgag
cagttcctctgctcgcccgacgacttcgacgagtgggccgacgaccgcgacggcgacgcc
tacagccacgaggcgttctaccgctggatgcgccgcgagacgggctacctgctgaccgac
ggcgaccccgagggcggcgagtggaactacgacgagcagaaccgcgagacgccacctgac
gactacgagagcgcgccgctcccggagttcgagtacggcgagcgcgttcccgaggtccgg
gagtgggtcgccgcggagttcgacacgtggggcgaccccgacgggttcggctggccggtc
gcccgccagcacgccgagcgcgcgctcgacgacttcctcgaccaccggctcgcggagttc
ggcccctacgaggacgcgatgctcgccgacgactggcacctcgaccacagcctgctgtcg
gccgcgctgaacgtcggcctgctcggcccgcgggaggtcgtggaggccgccatctcggcg
taccgcgagcgagaggacatcccgctgcactccgtcgaagggttcgtccgccaagtcgtc
ggctggcgggagttcgtgcgccacgtgtaccgccgcgagatgcccgaactcgcggacgcg
aaccagctcgaccagacccgggaactgccgccgctgtactgggaccccgacgcgaccgag
atggcctgcgtcgggaccgccgtggggcgcgtccacgaccgcggctacacccaccacatc
gagcggctgatggtgctgtcgaacttcgccctgctgtacgggactagtccacaggcgctc
aacgagtggttctacggcgggttcgtggacgccttccactgggtcgtcacgccgaacgtc
gtcggcatggggtcgttcggcaccgcggcgttcacgacgaagccgtacgccgcgtccgcg
aactacgtggaccgcatgagcgacttctgcgcgggctgtcgctacgaccccgacagtacg
accggcgcggacgcctgcccgttcaacagcctctactgggacttcctcgccgcccgcgag
gacgacctccgcgcgaaccaccggatgggcctcgtctacagtcacctcgacgacaagcgc
gacgccggcgacctcgcggcgattcgcgagcgcgccgacgcggtccgctcgcgtgcggcg
tccggcgacctctga
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