Halobacterium hubeiense: Hhub_2744
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Entry
Hhub_2744 CDS
T04202
Symbol
rad25b
Name
(GenBank) DNA repair helicase Rad25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03022
Basal transcription factors
hhb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hhub_2744 (rad25b)
09124 Replication and repair
03420 Nucleotide excision repair
Hhub_2744 (rad25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_2744 (rad25b)
03400 DNA repair and recombination proteins [BR:
hhb03400
]
Hhub_2744 (rad25b)
Enzymes [BR:
hhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hhub_2744 (rad25b)
Transcription machinery [BR:
hhb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Hhub_2744 (rad25b)
DNA repair and recombination proteins [BR:
hhb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Hhub_2744 (rad25b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
ERCC3_RAD25_C
Helicase_C
SNF2-rel_dom
DEAD
AAA_30
AAA_22
AAA_5
AAA
AAA_33
AAA_11
AAA_25
HTH_20
TrmB
TMP_2
Motif
Other DBs
NCBI-ProteinID:
CQH58408
UniProt:
A0A0U5H638
LinkDB
All DBs
Position
I:1593942..1595741
Genome browser
AA seq
599 aa
AA seq
DB search
MTDISKEAFHDALEAVGRPVATAAQVARELDCTQAEAADALAELAESGDVERADVENDPV
VWYPRDWLELTDRERVVPFPDRREIVVDQPAQFTRAQLSRFAHLADTTRSGSYRYVVREE
DVWAAPFESLDDLLDAMDRVLPRDCPGLKDWVEEQWNRATRFRLVTHEDGYVVLEAKTES
LLGNVADQHLADDVIRAPISDTEAWVAENKVAELKRTLYEAGYPVQDERDLESGEPLDVD
LHLELRDYQQDWVERFVDASSGVLVGPPGSGKTVAAMGVLEAVGGETLILVPSRELAAQW
REELLAHTSLERDQIGEYHGGTKNVRPVTIATYQTAGMDRHRHVFDDREWGLVVYDEVHH
IPAEVARRSADLQSKHRLGLTATPVREDDKEEDIYTLVGPPIGTDWDALFDAGYVAEPTV
EIRYVPWRDDDARYEYAAESGHTRRRLAAENPAKDEEVKHLLRQHADKQALVFVDYLEQG
ERLAEAIDAPFVSGETRHAEREALFDRFRTGALDALVVSRIGDEGIDLPDAELAVVASGL
GGSRRQGAQRAGRTMRPGGQSLLFVLATRGTEEEDDARSRMRHLAAKGVRVTESGSEQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacatctccaaggaggcgttccacgacgcgctggaagccgtgggccgcccggtc
gcgaccgccgcgcaggtcgctcgggaactggactgcacgcaggcggaggcggccgacgct
ctcgccgaactcgccgagtcgggcgacgtggagcgcgcggacgtggagaacgaccccgtg
gtgtggtacccgcgggactggctggaactcaccgaccgcgagcgcgtggtgccgttcccg
gatcgccgcgaaatcgtcgtcgaccagcccgcgcagttcacgcgcgcccagctgtcgcgg
ttcgcgcacctcgcggacacgacgcgctcggggagctaccggtacgtggtgcgcgaggag
gacgtgtgggcggcgccgttcgagagcctcgacgacctcctcgacgcgatggaccgcgtg
ctcccgcgggactgccccggcctcaaggactgggtcgaagagcagtggaatcgcgcgacg
cggttccgcctcgtcacccacgaggacggctacgtcgtcctcgaagcgaagaccgagagc
ctgctggggaacgtcgccgaccagcacctcgccgacgacgtgattcgcgcgcccatctcg
gacacggaggcgtgggtcgccgagaacaaggtcgccgaattgaagcgcacgctctacgag
gccggctaccccgtccaggacgagcgcgacctcgaatccggggagccgctggacgtcgac
ctccacctcgaactccgggactaccagcaggactgggtcgagcgcttcgtcgacgcgagt
tcgggcgtgctcgtcgggccgccggggtcggggaagaccgtcgccgcgatgggcgtgctc
gaagccgtcggcggcgagacgctgattctggtgccgagccgcgagctcgcggcgcagtgg
cgcgaggaactgctcgcgcacacgagcctcgaacgcgaccaaatcggggagtaccacggc
ggcacgaagaacgtgcgcccggtcaccatcgcgacgtaccagaccgcggggatggaccgc
caccgccacgtcttcgacgaccgcgagtgggggctggtcgtctacgacgaagtccaccac
atccccgcggaggtcgcacggcggtccgcggacctccagagcaagcaccgcctcgggctc
acggcgacgcccgtccgcgaggacgacaaggaggaagacatctacacgctcgtcgggccg
cccatcggcacggactgggacgcgctgttcgacgcgggctacgtcgccgaaccgaccgtc
gagattcggtacgtgccgtggcgcgacgacgacgcccgctacgagtacgccgccgagagc
gggcacacgcgccgccggctcgccgccgagaaccccgcgaaagacgaggaagtgaagcac
ttgctccgccagcacgccgacaagcaggcgctcgtgttcgtggactacctcgaacagggc
gaacggctcgccgaagccatcgacgcgccgttcgtcagcggggagacgcggcacgccgaa
cgcgaggcgctgttcgaccgattccgcacgggcgcgctggacgcgctggtcgtctcccgc
atcggcgacgagggcatcgacctgccggacgccgaactcgccgtcgtcgcctcgggactg
ggcgggagtcgccggcagggcgcccagcgcgccggccggacgatgcggccgggcggccag
tcgcttttgttcgtgctggcgacccgcggcaccgaggaggaggacgacgcccgcagccgg
atgcgccacctcgccgcgaagggcgtccgcgtcacggagtccggcagcgaacaggcctga
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