Halobacterium hubeiense: Hhub_2773
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Entry
Hhub_2773 CDS
T04202
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hhub_2773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhb03019
]
Hhub_2773
Messenger RNA biogenesis [BR:
hhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Hhub_2773
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
PAS_4
Motif
Other DBs
NCBI-ProteinID:
CQH58549
UniProt:
A0A0U5H2L2
LinkDB
All DBs
Position
I:1620114..1621460
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AA seq
448 aa
AA seq
DB search
MEIEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSQVLIHDNVETEKMHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVASPFTLELVKGQIEGEQK
FGVDNDLVEMESGETMQIGEECELEFVHVTHSIIDAINPVLHTPEGSVVYGLDKRIDHDP
VLEDPIDMERFREIGREGEGVLCYIEDCTNAGRKGRTPSESVARRHLKDAMQSMEDYDGG
IVATTFSSHVSRVSSLVEFAKDIGREPILLGRSMEQYSGTAERMGRVNFPDDLGMFGHRK
SVDRAFKRVMNEGKENFLPIVTGHQGEPRAMLTRMGRGETPYDIENGDKVIFSARVIPEP
TNEGQRYQSEQLLRMQGARIYDDIHVSGHLREEGHYEMMQALQPQHIIPAHQDMKGFAPY
VSLAESQGYKVGRDLHVTSNGNTIQLVE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaatcgcaacaatcggcggatacgaagaagtcggtcggcagatgactgcc
gtccgagccggtgacgacattgtcattttcgacatgggcctcaacctctcgcaggtcctg
attcacgacaacgtcgagaccgagaagatgcacagcctcgacctcatcgacatgggcgcc
atcccggacgaccgcgtcatgtccgacctcgagggcgacgtgcaggcaatcgtgccgacg
cacggccacctcgaccacatcggcgcaatcagcaagctcgcacaccgatacgacgcgccc
atcgtcgcgtcgccgttcacgctcgaactcgtgaaaggccagatcgagggcgagcagaag
ttcggcgtggacaacgacctcgtggagatggagtccggcgagacgatgcagatcggcgag
gagtgcgaactcgagttcgtccacgtcacccactccatcatcgacgctatcaaccccgtc
ctccacacgccggagggctcggtcgtctacgggctcgacaagcgcatcgaccacgacccg
gttctggaagaccccatcgacatggagcggttccgggaaatcgggcgcgagggcgagggc
gtcctctgttacatcgaggactgcacgaacgccggccggaagggccgcacgccctccgag
agcgtggcgcggcgccacctcaaggacgcgatgcagagcatggaggactacgacggcggc
atcgtcgccacgacgttctccagccacgtctcccgggtgtcctcgctggtggagttcgcg
aaggacatcggccgggagccgattctgctcggccgctcgatggagcagtactcgggcacc
gccgagcgcatgggccgcgtgaacttcccggacgacctcgggatgttcggccaccgcaag
agcgtcgaccgcgcgttcaagcgcgtgatgaacgagggcaaggagaacttcctgcccatc
gtcacgggccaccagggcgagccgcgcgcgatgctcacccgcatgggccgcggcgagacg
ccgtacgacatcgagaacggtgacaaggtcatcttctcggcgcgcgtcatcccggaaccg
accaacgagggccagcgctaccagagcgaacagctcctccgcatgcagggcgcgcgcatc
tacgacgacatccacgtctccggccacctccgcgaggagggccactacgagatgatgcag
gcgctccagccccagcacatcatccccgcccaccaggacatgaagggcttcgcaccgtac
gtcagcctcgcggagagtcaggggtacaaggtcggtcgcgacctccacgtgacctcgaac
ggcaacaccatccagctcgtcgagtag
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