KEGG   Halobacterium hubeiense: Hhub_2773
Entry
Hhub_2773         CDS       T04202                                 
Name
(GenBank) beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hhb  Halobacterium hubeiense
Pathway
hhb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hhb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Hhub_2773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhb03019]
    Hhub_2773
Messenger RNA biogenesis [BR:hhb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Hhub_2773
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL PAS_4
Other DBs
NCBI-ProteinID: CQH58549
UniProt: A0A0U5H2L2
LinkDB
Position
I:1620114..1621460
AA seq 448 aa
MEIEIATIGGYEEVGRQMTAVRAGDDIVIFDMGLNLSQVLIHDNVETEKMHSLDLIDMGA
IPDDRVMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVASPFTLELVKGQIEGEQK
FGVDNDLVEMESGETMQIGEECELEFVHVTHSIIDAINPVLHTPEGSVVYGLDKRIDHDP
VLEDPIDMERFREIGREGEGVLCYIEDCTNAGRKGRTPSESVARRHLKDAMQSMEDYDGG
IVATTFSSHVSRVSSLVEFAKDIGREPILLGRSMEQYSGTAERMGRVNFPDDLGMFGHRK
SVDRAFKRVMNEGKENFLPIVTGHQGEPRAMLTRMGRGETPYDIENGDKVIFSARVIPEP
TNEGQRYQSEQLLRMQGARIYDDIHVSGHLREEGHYEMMQALQPQHIIPAHQDMKGFAPY
VSLAESQGYKVGRDLHVTSNGNTIQLVE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaaatcgaaatcgcaacaatcggcggatacgaagaagtcggtcggcagatgactgcc
gtccgagccggtgacgacattgtcattttcgacatgggcctcaacctctcgcaggtcctg
attcacgacaacgtcgagaccgagaagatgcacagcctcgacctcatcgacatgggcgcc
atcccggacgaccgcgtcatgtccgacctcgagggcgacgtgcaggcaatcgtgccgacg
cacggccacctcgaccacatcggcgcaatcagcaagctcgcacaccgatacgacgcgccc
atcgtcgcgtcgccgttcacgctcgaactcgtgaaaggccagatcgagggcgagcagaag
ttcggcgtggacaacgacctcgtggagatggagtccggcgagacgatgcagatcggcgag
gagtgcgaactcgagttcgtccacgtcacccactccatcatcgacgctatcaaccccgtc
ctccacacgccggagggctcggtcgtctacgggctcgacaagcgcatcgaccacgacccg
gttctggaagaccccatcgacatggagcggttccgggaaatcgggcgcgagggcgagggc
gtcctctgttacatcgaggactgcacgaacgccggccggaagggccgcacgccctccgag
agcgtggcgcggcgccacctcaaggacgcgatgcagagcatggaggactacgacggcggc
atcgtcgccacgacgttctccagccacgtctcccgggtgtcctcgctggtggagttcgcg
aaggacatcggccgggagccgattctgctcggccgctcgatggagcagtactcgggcacc
gccgagcgcatgggccgcgtgaacttcccggacgacctcgggatgttcggccaccgcaag
agcgtcgaccgcgcgttcaagcgcgtgatgaacgagggcaaggagaacttcctgcccatc
gtcacgggccaccagggcgagccgcgcgcgatgctcacccgcatgggccgcggcgagacg
ccgtacgacatcgagaacggtgacaaggtcatcttctcggcgcgcgtcatcccggaaccg
accaacgagggccagcgctaccagagcgaacagctcctccgcatgcagggcgcgcgcatc
tacgacgacatccacgtctccggccacctccgcgaggagggccactacgagatgatgcag
gcgctccagccccagcacatcatccccgcccaccaggacatgaagggcttcgcaccgtac
gtcagcctcgcggagagtcaggggtacaaggtcggtcgcgacctccacgtgacctcgaac
ggcaacaccatccagctcgtcgagtag

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