Halobacterium hubeiense: Hhub_3134
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Entry
Hhub_3134 CDS
T04202
Symbol
cbf5
Name
(GenBank) tRNA/rRNA pseudouridine synthase Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhb03016
]
Hhub_3134 (cbf5)
Enzymes [BR:
hhb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hhub_3134 (cbf5)
Transfer RNA biogenesis [BR:
hhb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hhub_3134 (cbf5)
Prokaryotic type
Hhub_3134 (cbf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
SPE17
Motif
Other DBs
NCBI-ProteinID:
CQH60092
UniProt:
A0A0U5HW50
LinkDB
All DBs
Position
I:complement(1941408..1942301)
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AA seq
297 aa
AA seq
DB search
MLRDAPADRDPDDVFEFGVVNLDKPPGPSAHQVSAWIRDMVGVEKAAHAGTLDPKVTGCL
PVLTGAATRLAPALLEGPKEYVAVLELHADPPANLRDVIEEFEGPTYQKPPRKSAVARRL
RVREIHDLDVLEVNDRQALLRIRCESGTYIRKLCHDLGRALGTGAHMGHLRRTATTPFDD
TTLATLHDLADALAWLRDEDDTSPPSGDPEAALREVLVPAERALEHIPSVTIAPSAAEQV
AEGAPVYAPGVISAEDADRDQLVACYAPNGAAVCLGRRVGNPDADSGTVVELERVLV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagacgcccccgcggaccgcgaccccgacgacgtcttcgagttcggcgtcgtc
aacctcgacaagccgccggggccctctgcccaccaggtgtcggcgtggattcgggacatg
gtcggcgtcgagaaggccgcgcacgcgggcacgctggaccccaaggtcacgggctgtctg
cctgtcctgacgggtgcggcgacccggctcgcgcccgcgctgctggaaggccccaaggag
tacgtcgccgtgctggaactgcacgccgacccgcccgcgaacctccgcgacgtaatcgag
gagttcgaggggccgacctaccagaagccgccgcggaagtccgcggtcgcgcgccgcctg
cgcgtccgtgagattcacgacctcgacgtcctcgaagtgaacgaccggcaggcgctgttg
cgcatccgctgcgagtccgggacctacattcgaaaactctgccacgacctcgggcgcgcg
ctcggcaccggcgcgcacatgggacacctccgccgcactgcgacgacgccgttcgacgac
accacgctggcgacgctgcacgacctcgcggacgcgctcgcgtggctgcgcgacgaggac
gacaccagcccgccgagcggcgaccccgaagccgcgctccgcgaggtgctcgtgcccgcc
gagcgcgcgctcgaacacatcccgtcggtgaccatcgcgccctccgccgccgaacaggtc
gcggaaggcgcgcccgtctacgcccccggcgtcatcagtgcggaggacgccgaccgcgac
cagctcgtcgcgtgctacgcgcccaacggcgccgcagtctgcctcggccgccgcgtcggc
aacccggacgctgactccggcaccgtggtcgaactcgaacgcgtcctcgtgtaa
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