Halobacterium hubeiense: Hhub_3209
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Entry
Hhub_3209 CDS
T04202
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhb03016
]
Hhub_3209
Enzymes [BR:
hhb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Hhub_3209
Transfer RNA biogenesis [BR:
hhb03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Hhub_3209
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
AroM
SPL
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
CQH60429
UniProt:
A0A0U5H907
LinkDB
All DBs
Position
I:2005618..2006871
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AA seq
417 aa
AA seq
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MAQYHIETYGCTSNRGESREIERRLRDAGHHKVEGADEADVAILNTCTVVEKTERNMLRR
AEELEDETADLIVTGCMALAQGEEFAQADVDAQVLHWDDVPEAVTNGECPTTTPDAEPIL
DGVIGILPIARGCMSNCSYCITKQATGRVDSPPVEENVEKARALVHAGAKEIRITGQDTG
VYGWDDGERKLPELLERIATEIEGDFRVRVGMANPGGVHGIREELAAVFAEHDEIYNFLH
GPVQSGSDDVLEDMRRQHEVEQYVDIVETFDDYLEEWTLSTDFIVGFPTETDHDHEQSMA
LLRETRPEKINVTRFSKRPGTDAAELKGLGGQTKKDRSKAMTDLKMDVVGDAHEEMVGTE
RNVLVTEEGTGDSVKCYDDSYRQIIVQNASEHGLEPGDFATVEVTGHQTVYAFGEPV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtaccacatcgagacgtacgggtgtacctcgaaccgcggcgagagccgcgaa
atcgagcggcgcctccgcgacgccggccaccacaaggtcgagggggccgacgaggcggac
gtcgccatcctcaacacctgtacggtcgtggagaagacggagcgcaacatgctccggcgg
gccgaggaactcgaggacgagacggccgacctcatcgtcacgggctgcatggcgctcgcg
cagggcgaggagttcgcgcaagcggacgtggacgcccaagtcctgcactgggacgacgtg
cccgaggccgtgacgaacggcgagtgcccgacgacgacgccggacgccgagccgattctg
gacggcgtcatcggcatcctccccatcgcccgcggctgcatgagcaactgctcgtactgc
atcacgaagcaggcgaccgggcgcgtggactccccgcccgtcgaggagaacgtcgagaag
gcgcgcgcgctcgtccacgccggcgcgaaggagattcgcatcaccggccaggacaccggc
gtctacggctgggacgacggcgagcgcaagctccccgagctactggagcgcatcgccacc
gaaatcgagggcgacttccgcgtccgcgtcgggatggcgaacccgggcggcgtccacggc
atccgcgaggaactcgcggcagtgttcgccgagcacgacgagatttacaacttcctgcac
gggcccgtgcagtccggcagcgacgacgtgctcgaagacatgcgccgtcagcacgaggtc
gagcagtacgtcgacatcgtggagaccttcgacgactacttggaggagtggacgctctcg
acggacttcatcgtcggcttccccaccgagaccgaccacgaccacgagcagtcgatggcg
ctcctgcgggagacgcgcccggagaaaatcaacgtcacgcggttctccaagcgccccggc
accgacgccgccgagctgaagggactcggcggccagacgaagaaggaccgctcgaaggcg
atgaccgacctgaagatggacgtggtcggcgacgcccacgaggagatggtcggcaccgag
cggaacgtcctcgtcaccgaggaagggaccggcgactccgtgaagtgctacgacgacagc
taccgacagattatcgtccagaacgccagcgagcacgggctcgaacccggggacttcgcg
accgtcgaggtcaccggccaccagaccgtctacgcgttcggcgagcccgtctga
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