Halobacterium hubeiense: Hhub_3347
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Entry
Hhub_3347 CDS
T04202
Symbol
spt4
Name
(GenBank) transcription elongation factor Spt4
KO
K15171
transcription elongation factor SPT4
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Hhub_3347 (spt4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_3347 (spt4)
03019 Messenger RNA biogenesis [BR:
hhb03019
]
Hhub_3347 (spt4)
Transcription machinery [BR:
hhb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Hhub_3347 (spt4)
RNA polymerase I system
Hhub_3347 (spt4)
Messenger RNA biogenesis [BR:
hhb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Hhub_3347 (spt4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DUF7575
DZR
Zn_ribbon_19
Zn_ribbon_15
HypA
Zn_Ribbon_TF
Zn_ribbon_3
MJ0401
Motif
Other DBs
NCBI-ProteinID:
CQH61013
UniProt:
A0A0U5D0I2
LinkDB
All DBs
Position
I:complement(2121378..2121575)
Genome browser
AA seq
65 aa
AA seq
DB search
MASNRLACHDCHRIVEPDEEMCPYCSSTSLTEDWAGYVVITHPEESEIAEKMEVSEPGEY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaccgcctggcctgccacgactgccaccgcatcgtcgagccggacgaggag
atgtgcccgtactgctcgtcgacgagcctcacggaggactgggcggggtacgtggtcatc
acgcaccccgaggagtccgaaatcgcggagaagatggaggtctcggagccgggcgagtac
gcgctgaaggtccggtag
DBGET
integrated database retrieval system
