Halobacterium hubeiense: Hhub_3348
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Entry
Hhub_3348 CDS
T04202
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hhub_3348 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_3348 (rpoE1)
Enzymes [BR:
hhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hhub_3348 (rpoE1)
Transcription machinery [BR:
hhb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hhub_3348 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Chlorophyllase
Motif
Other DBs
NCBI-ProteinID:
CQH61017
UniProt:
A0A0U5D0A4
LinkDB
All DBs
Position
I:complement(2121576..2122139)
Genome browser
AA seq
187 aa
AA seq
DB search
MYKRARLKDTIEVPPEHLGDVSPDLVKRLLQDKLEGRMDEDIGSVVTVTEVHDLGEGAVL
PNRPGVYFKAEFDAVTFDPEMQEVVDGEIVEVVSFGAFVGIGPVDGLLHVSQISDEYLAF
DEENQQLASRESNSVIGTGDSVRARIVTKSIDERNPRESKIGLTAKQPGLGKHGWLREER
EQSEEAE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagcgagcacggctgaaagacacgatagaggttccgcccgagcacctcggggac
gtgagtccggacctcgtgaagcggctgctgcaggacaaactggaaggacggatggacgag
gacatcgggagcgtcgtcaccgtcaccgaggtccacgacctcggtgagggcgcggtgctg
ccgaaccgtcccggcgtctacttcaaggcggagttcgacgccgtcacgttcgacccggag
atgcaggaagtcgtcgacggcgaaatcgtcgaagtggtgagcttcggcgcgttcgtcggc
atcggccccgtcgacgggctcctgcacgtctcccagattagcgacgagtacctcgcgttc
gacgaggagaaccagcagctcgcctcccgggagtccaacagcgtcatcggcactggcgac
tcggtgcgggcccgcatcgtcacgaagagcatcgacgagcgcaacccccgcgagtccaag
atcgggctcacggcgaaacagcccggcctcgggaagcacggctggctccgcgaggagcgc
gagcagagcgaggaggccgagtag
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