Halobacterium hubeiense: Hhub_3641
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Entry
Hhub_3641 CDS
T04202
Symbol
rad3b
Name
(GenBank) DNA repair helicase Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03022
Basal transcription factors
hhb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hhub_3641 (rad3b)
09124 Replication and repair
03420 Nucleotide excision repair
Hhub_3641 (rad3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_3641 (rad3b)
03036 Chromosome and associated proteins [BR:
hhb03036
]
Hhub_3641 (rad3b)
03400 DNA repair and recombination proteins [BR:
hhb03400
]
Hhub_3641 (rad3b)
Enzymes [BR:
hhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Hhub_3641 (rad3b)
Transcription machinery [BR:
hhb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Hhub_3641 (rad3b)
Chromosome and associated proteins [BR:
hhb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Hhub_3641 (rad3b)
DNA repair and recombination proteins [BR:
hhb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Hhub_3641 (rad3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
Zot
ATPase
AAA_34
HBB
PhoH
DUF7563
Terminase_6N
SecA_DEAD
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
CQH62103
UniProt:
A0A0U5D1A7
LinkDB
All DBs
Position
I:2392373..2394583
Genome browser
AA seq
736 aa
AA seq
DB search
MAASNSPDYMEFFPKASPYDNQREAMDGIRDALDSGRDVLFEGACGTGKTLAALAPALSH
ARETNKTVVITTNVHQQMRQFVREAREIHDAEPLRAVVFKGKGSMCHIDVDYEECQVLRD
NTHELVDAERDKQQLEERQQALLEESQDGDSEAAEAREAVLDELESVEDELEDLQEGNVC
ERYYENLVGDNDDFYEWLYDGVRTPEDIYEYAEEAGLCGYELLKDGIEGVDLAVCNYHHL
LDPGIRAQFFRWLGRDPEDVVVVFDEAHNVEDAARDHATRTLTENTLDSALSELEEVTDD
RGAAAERVLSAFRDALVETYEGAFGPGGDGPALARSEVDGNWTDVPVANEDKRDDLTLEF
LQQYTGPGIREDVDDALALGEYLDEEYDEAYRNGETTTRRECFVLEAAEFVESYVEDSGE
LGQYPTAAVRRDEGTNDVYGRAELYTCIPRDVTTDLFDAVHASVLMSATLRPFDVTADVL
GLEDPETMAFGLQFPEERRRTFAVDTEPLFSSNRDDPDTQEEVAGALRDAVNFTPGNCLF
FFPSYAEAERYHDLLGDVDAARYLDQPGTSAEELRQTFTDDRNGVLFTSLWGTLAEGVSF
DGDDARTVAVVGVPYPHLDARAEAVQDAYGRVFGDRDDRRNEDAGWRYAVEIPTVRKTRQ
AMGRVIRSPDDFGVRMLVDRRYTKESRTAMRKYSVNPAFPAEERRELVDIDPEKLRVSML
NFYTDLDAYDGQPPRP
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcgagcaactccccggactacatggagttcttcccgaaggcgtcgccgtacgac
aaccagcgggaggcgatggacggcatccgcgacgccctcgacagcggccgcgacgtcctg
ttcgagggggcctgcgggaccgggaagacgctcgccgcgctcgcgccggcgctgtcgcac
gcccgcgagaccaacaagacggtcgtcatcacgacgaacgtccaccagcagatgcgccag
ttcgtgcgcgaggcccgcgaaattcacgacgccgagccgctgcgcgcggtcgtcttcaag
gggaaggggtcgatgtgccacatcgacgtcgactacgaggagtgtcaggtcctccgcgac
aacacccacgagctggtggacgccgagcgcgacaaacagcagttggaggagcgccagcag
gccctgttggaggagagccaggacggcgacagcgaggccgccgaggcgcgcgaggcggta
ttagacgaactggagtccgtggaggacgaactcgaagacctccaggaggggaacgtctgc
gagcgctactacgagaacctcgtcggggacaacgacgacttctacgagtggctctacgac
ggcgtccgcacgcccgaggacatctacgagtacgccgaggaggcgggcctctgcgggtac
gaactcctgaaggacggcatcgagggcgtggacctcgcggtctgcaactaccaccacctg
ctggacccggggattcgcgcgcagttcttccgctggctgggccgcgaccccgaggacgtg
gtggtggtgttcgacgaggcgcacaacgtcgaggacgccgcgcgcgaccacgccacgcgg
acgctcaccgagaacaccctcgacagcgcgctctccgaactggaggaagtcacggacgac
cgcggcgcggccgcagagcgcgtgctgtcggcgttccgggacgcgctcgtggagacctac
gagggcgcgttcgggccgggcggcgacggtcccgcgctcgcgcgctcggaagtggacggg
aactggacggacgtcccggtggcgaacgaggacaagcgcgacgacctcacactcgagttc
ctccagcagtacaccggccccggcatccgggaggacgtcgacgacgcgctcgcgctcggc
gagtacctcgacgaggagtacgacgaggcctaccggaacggcgagacgaccacgcgccgg
gagtgcttcgtgctggaggccgcggagttcgtggagtcgtacgtcgaggacagcggcgaa
ctcggccagtacccgactgcggcggtgcgccgcgacgaggggacgaacgacgtctacggc
cgcgcggaactgtacacgtgcatcccgcgggacgtgacgacggacctcttcgacgccgtg
cacgccagcgtcctgatgagcgcgacgctgcggccgttcgacgtcaccgcggacgtgctc
ggcctggaggacccggagacgatggcgttcggcctccagttccccgaggagcgccggcgc
acgttcgcggtggacacggagccgctgttctcctcgaaccgcgacgaccccgacactcag
gaggaagtcgcgggcgcgctccgggacgccgtgaacttcacgcccgggaactgcctgttt
ttcttcccgagctacgcggaagccgagcgctaccacgacttactgggggacgtggacgcc
gcgcgctacctcgaccagccgggcacgagcgccgaggagctccggcagacgttcacggac
gaccgcaacggcgtcctgttcacgtcgctgtgggggacgctcgcggagggcgtgagcttc
gacggcgacgacgcccgcaccgtcgcggtcgtcggcgtcccctacccccacttggacgcg
cgcgccgaagccgtccaggacgcctacgggcgcgtgttcggcgaccgcgacgaccgccgc
aacgaggacgccggctggcgctacgccgtcgagattcccaccgtccgcaagacgaggcag
gcgatgggccgcgtcatccgctcccccgacgacttcggcgtgcggatgctcgtggaccgc
cgctacaccaaggagagccgcaccgcgatgcgcaagtacagcgtcaaccccgcgttcccc
gccgaggagcgccgcgaactcgtggacatcgaccccgagaagctccgcgtgtcgatgctg
aacttctacacggacctcgacgcctacgacggtcagccccctcgtccgtag
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