Halobacterium hubeiense: Hhub_4212
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Entry
Hhub_4212 CDS
T04202
Name
(GenBank) receiver/sensor/bat box HTH-10 family transcription regulator
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhb03000
]
Hhub_4212
Transcription factors [BR:
hhb03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hhub_4212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
Response_reg
PAS_4
GAF_3
GAF
PAS_9
PAS
OKR_DC_1_N
GerE
HTH_11
HI0933_like_1st
Motif
Other DBs
NCBI-ProteinID:
CQH63873
UniProt:
A0A0U5D288
LinkDB
All DBs
Position
pSTJ001:209569..212442
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AA seq
957 aa
AA seq
DB search
MNPESRSILGTSTIVAVGDTAWLASYVDALREQFDAAVHYVSTAAATRETLQRTAVDCVV
TDYRLPEATAIELVRSIRETTATLPIILGTADGSESIASTAIEAGVTDYIAVTGPLDDTV
TDALRRTEQALRDAQRAETQRERARQFDAAFHDPRSATWVLDPEGALERVDQTARDMIDV
DADVVVGDPFWTLPWWPDEGQTSADIRRLVETANRGEFGHAVVTQRGVSGERVLELSVQP
VTDERGDLVSIIVDGVDITERVDLERELRQSEELHRVTLNNMTDTVLMTDEDGEYTYVCP
NVHFIFGYTAEEIRELGTIEALLGEDLFDREDLAEDGVLKNIETTATDKAGREHTLLVNV
REVSIQDGTLLYSCRDITKRKQRERALATLQETARDFLYAETHHEISQHVVDDAPDVLNL
DASAVYLFDADDNHLQPTAYSQAMRNAHGPLADVHADGRDLTSNSFVENEARFFDDVHDA
DLLANPVTDLRSIAYIPLGNHGVFVAGSTDVGAFDDVTRELADLLAATAEAALDRVDRES
QLREQDRELQRQNDQLTTLNQINGTIREIDQALVQSETREEIDHTVCERLTADGRFQFAW
IGTLDSTNDVVTPQAWAGADQGYLDTQSFPVAAEAVEPAGRTAATGEVTLVSNVAADLRA
ASWRKDAISRDLLSVLSIPLVYNDLSYGVLTVYAETPDAFDETIQTVLAELGETIASAIS
ASERKRALLTTSMTRVEYTVTDPSFVLAQLARAANCTITYEGGVQQTASGNYVFVTVQDA
PLDMVVDVATGLHVIEDVQRIRGGETGGVLRLRLAEPFLATELADHGAVLQTATASQAGT
EFVIDVPGNAEARNVTQFVTQRFEDVELTSKQTREQASEHGFYASVLDSLTDRQLEVLET
AYYSGFFESPRSVTGEAVAESLDISPQAFYQHIRTVQRKLFAALIDGHVPVVSQRAD
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaatcccggagtattctcggcacgtcgacgatcgtcgctgtgggcgacaca
gcgtggctagcttcgtacgttgacgccctccgcgaacagttcgacgcggctgttcattac
gtctcgacggcagccgccacccgagaaacgctgcaacggacggcagtcgactgcgtcgta
actgactaccgcctccccgaggcgacggcgatcgaactcgttcgcagcattcgagaaacg
accgctacgcttcccatcatcttagggacggccgacgggagcgagtcgatcgccagcacg
gcgatcgaagccggtgttaccgactacattgcggtcactggcccgctggacgatactgtc
accgacgccctgcggcgaaccgagcaggcactgcgggacgcccaacgggcggagacacag
cgcgagcgggcgcgacagttcgacgccgcattccacgaccctcggtcagcgacgtgggta
cttgaccccgagggggcgctcgagcgcgtcgaccagacggcacgcgacatgatcgacgta
gacgccgacgtcgtcgttggcgacccattttggacactgccttggtggcctgacgagggt
cagacgagcgctgacatccgtcggctcgtcgagacagccaaccgcggcgagttcgggcac
gctgtggtcactcagcgcggtgtctctggagagcgagtactggagctctccgtccaacca
gtcaccgacgaacgcggcgacctcgtctcgatcattgtcgacggtgtcgacatcaccgag
cgtgttgacctcgagcgggaactccgccagtcagaggaactccaccgcgtcacgctcaac
aacatgactgacaccgtcctcatgaccgacgaggacggcgagtacacgtacgtctgcccc
aacgtccacttcatcttcgggtacacggccgaagagatccgggagctgggtacgatcgag
gccttgctcggcgaggacttgttcgaccgcgaggacctcgccgaggacggcgtcctgaag
aacattgagacgacggccacggacaaggccggccgcgaacacacgttgctggtgaacgtt
cgcgaggtctcgattcaggacggcacgctgctgtatagctgccgtgacatcacgaagcgc
aagcagcgcgagcgagccctcgcaaccctccaggagaccgcgcgggacttcttgtacgcc
gaaacgcaccacgaaatttcccaacacgtcgtcgacgatgcccccgacgttctcaacctc
gacgcgagcgccgtctacctcttcgatgccgatgacaaccacctccagccgaccgcgtac
tcacaggcgatgcggaacgcccacggcccccttgcggacgtccacgcggacggccgcgat
ctcaccagtaacagcttcgtcgagaatgaggcccggttcttcgacgacgtccacgacgcc
gacctcctcgccaatcccgtgactgacctccggagcatcgcgtacattccactcggaaac
cacggcgtgttcgtcgccggatcaaccgacgtcggcgccttcgacgacgtgacgcgggaa
cttgcggacttgctcgcggcgacggcggaagcagcgttggaccgcgtcgaccgggaatcc
cagcttcgcgagcaggaccgggaacttcagcgacagaacgaccaacttaccacgctcaac
cagatcaacgggacgatccgcgagattgaccaggcgctcgtgcagtcggagacccgcgag
gaaatcgaccacacggtctgtgaacgacttactgcggatggacgctttcagtttgcctgg
atcggcaccctcgatagcacgaatgacgtcgtgaccccccaagcgtgggccggggctgat
cagggctatcttgatacgcagtcgttcccggtcgccgctgaggccgttgagccggccggt
cggactgcggcgactggtgaggtgacgctagtctcgaacgttgcggctgatctccgggcg
gcttcatggcgcaaggacgcgatttcacgcgaccttttgtccgtgctgagtattccgctg
gtgtacaacgacctctcgtatggcgttctgacggtgtacgcggagacaccggacgccttc
gatgaaacaatccagactgtgctcgcggagctcggtgagacgatcgcctccgcaattagt
gcaagtgagcgcaagcgcgcgctgctcaccacatcgatgactcgcgtcgagtacacggtt
actgatccgtcgttcgtgctcgcgcaactggcgcgggctgccaactgtacgatcacgtac
gaaggcggcgtccagcagactgctagtggaaactacgtgttcgtcacggtccaagacgca
ccgcttgacatggtcgtcgacgtggcaactggcctccacgtgattgaggacgtccagcgg
attcgtggtggtgagactgggggcgtgttgcggctccggttggcggagccgttcctggcg
acggaactggccgaccacggtgctgtcctgcagaccgcgacggcatcacaggccggaacg
gagttcgtcatcgacgtccctgggaacgctgaggccagaaacgtcacgcagttcgtcacc
cagcgcttcgaggacgttgagctgacgtcgaagcagacgcgcgagcaggcgtccgaacac
ggcttttacgcgtcagtgctggacagcctgactgacaggcaactggaggtcctggagacg
gcgtactacagcgggttcttcgagtcgccgcggtcggtgactggtgaagccgtcgcggag
tcgctggacatctcgccgcaggcgttctatcagcacatccggaccgttcagcggaaactc
ttcgcggcgttgatcgacgggcacgtaccggtggtctctcaacgtgcggactaa
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