Halobacterium hubeiense: Hhub_5064
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Entry
Hhub_5064 CDS
T04202
Symbol
tfbA9
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hhub_5064 (tfbA9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_5064 (tfbA9)
Transcription machinery [BR:
hhb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hhub_5064 (tfbA9)
Prokaryotic type
Archaeal type
TFB
Hhub_5064 (tfbA9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
DZR
Motif
Other DBs
NCBI-ProteinID:
CQH64539
UniProt:
A0A0U5H944
LinkDB
All DBs
Position
pSTJ002:54964..55941
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AA seq
325 aa
AA seq
DB search
MGEGLAVLAGSRNTVRTMATRDIYESGFDEDVRTESSANQCPECDGRVTTNAVETVCEDC
GLVIDEQRIDHGPEWRAYDDEERERTGAPLTAARHDRGLSTEIGRGTDAKGNEISGQKRR
RLARMRREQTRGRWRSKAERNLAHGLGEVRRLASALELSDSVRDQACQLFRSAQNEDLLR
GRSIEAIAAASVYGACRCNGLSRLVDDVSEMARVAESRVTNAYKTLNEELGLPAEPVSPS
MFVPRLASDLECPDEIRQRARTLAEQAEERGVTTGVHPAGFAAACLYKAGRKEGRWLTQS
EAADVANASKATVRAHRDTLEEQVA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagggactcgctgtactggcgggttcccgaaacacggtgagaacgatggcaact
agagacatctacgagagcggattcgacgaggacgtccgaacggaatcgagtgcgaaccag
tgtcccgagtgcgacggtcgagtcaccacgaacgcggtcgaaacggtctgcgaggactgt
ggcctggtcatcgacgaacagcgcatcgatcacgggccggagtggcgggcgtacgacgac
gaggagcgcgagcgaacgggcgctccactcactgcggcccgccacgatcgcggcctgtcg
acggagatcggtcgcggcaccgacgcgaaggggaacgagatctctgggcagaagcgacgg
cgactcgcacggatgcgccgtgaacagacccgagggcgctggcggtcgaaagcggaacgg
aatctcgcacacgggttgggcgaggtgcgtcggttggcgagtgcgctcgaactctctgat
tcggtccgcgaccaagcgtgtcagctcttccggagcgcccagaacgaggatctgcttcgt
ggcaggtccatcgaggccatcgccgcggccagcgtctacggggcctgccggtgcaacggc
ctctcgcggttggtggatgacgtcagcgagatggcccgcgtcgcggagtcacgggttacg
aacgcgtacaaaacgttgaacgaggagctgggcctccccgctgagcccgtctcccccagc
atgttcgtgccgcgcctcgcctcggacctcgagtgtccggacgagatccgacagcgggcc
cgaacgctcgcggagcaggccgaggagcgcggcgtcacgacgggcgtccatccggccggg
ttcgcagcggcctgcctctacaaggccggtcgcaaggaggggcgatggctgacgcaatcc
gaggccgcggacgtggcgaacgcctcgaaggcgactgttcgggcacaccgagatacctta
gaggagcaggtggcctga
DBGET
integrated database retrieval system
