Halobacterium hubeiense: Hhub_5159
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Entry
Hhub_5159 CDS
T04202
Name
(GenBank) homolog to nuclease subunit B
Organism
hhb
Halobacterium hubeiense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CQH64713
UniProt:
A0A0U5H596
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All DBs
Position
pSTJ002:130014..133202
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AA seq
1062 aa
AA seq
DB search
MDSTLLTGPKHARLERRAFQRADDIAINSLGSILYITRNDARRSMVEDSWAVSHEPLRLR
AETLDAVVREWYEHLHGPVQPLSGQLNRRLAEYALDRTTAETDGALAGEPASAALADSFS
SRFSLFDDAGVGTADALAAEFEGSDLDDHIATATVDAYRHYRDLHADFVDEWVCTRGEMF
DAVATAEQSLSALSPELDVVILSGYHEFRPVERRLIERLADELPMIALLPLHQDGRSGVD
AVAEDALDVYEALDFETVELEPVDESGQAFGTITEALYRPDPDTVPSPDTLRWRERPTPE
REIRFVARELRTELANGRDPDDLAVVVPGTEAYSGYVEDTFDTFDIPHVTTDASQLNRTF
TGSVVHDLLNLAEPDPRAEDLTSLFANPLVNVVDTDQANAVTAAARRRGTVSVSPLLDDV
DDEAAELIENLLATLETLRTGDVEGATKTLRRLLDERFDLEGATEDYASGAEQAVEQRAY
DLVDEVLSSFESLAAVNSDLSPLALFTRAFDGVPIRVPQRAAGGHVEVMGLLDARMRSFE
KVFLVGLTSEHFPVTPERPAFFEEMTDAHPRFDTGDERLRGRYLFATLLANVDELTITTP
ETGDDESAVVRSPVLDELQRVTGIEPEDGVDDRVGSREDLQRHVAATADRRAAVSRAGDR
GDLSPEQTKRTDRGLHCAANRGTAGLSDHDGVLDPETVDEVYPPSEREPYSASRIERYVE
CGFKFYADEVLEIEDPDDVEVVPTPLETGSYVHDVLERFFADLQDETEDGVDLTEFDRND
LAIHLREIAVEELRDADFEYDGLFYERWKAELFAGLGDGESAPYEAGSKPHDAPEQGLFA
TFLDNELSRDGADRPHLFEAPFGEGLPDSDAGPFTVERPDGSTVSIRGYIDRVDVSQGGE
QPTLTLYDYKTGRAPYMTKTTGGTKFQLPIYLLAAANVVDGDLFEQGSLSATYYQVRPPN
DLKVPRGVESKFDSEAELRRFLNDVVPEWLGQIDEAIGNGRFHTTLLSARGANCRYCDYR
RACDVRHHRKREFVDEVNEDDAAYVPLRVRDDEDIETVMSDD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacgcttctgaccggtccgaaacacgcccgattggaacgacgggcatttcag
cgggctgatgatatcgcaattaattcgctggggagtattctctacataacgcggaacgac
gctcgccggagtatggttgaggacagctgggccgtttcccacgaacctctccgtcttcgt
gcggagacgcttgacgcggtcgttcgggagtggtacgagcatctccacggtccggttcaa
ccgctctccgggcagctgaaccgtcggctcgcggagtacgcgcttgaccgaacaacagcc
gagacagatggcgctcttgctggcgaaccagcctctgccgccctcgctgattcgttcagc
agtcgcttctcactcttcgacgacgccggcgtcggtaccgctgacgcactggcggcggag
ttcgagggctcagacctcgatgaccatatcgcgacagccactgtcgacgcgtaccgacac
taccgggatctccatgccgactttgtcgatgagtgggtctgtacccggggagaaatgttc
gacgccgtcgcaacggcggagcagtcactatcggcgctctccccggaactggatgtcgtc
atcctttccgggtatcacgagttccgccccgtcgaacgccgcctcatcgaacgcctcgcc
gacgagcttccgatgatcgcactgctgccactccaccaggatggccggagcggagtcgac
gccgttgcggaggacgccttggatgtgtacgaagcacttgactttgagacagtagaactc
gagcccgtcgacgagtcagggcaggcctttggaacgatcaccgaggcgctctaccgcccg
gaccccgacaccgtcccttctccagacactctgcgatggcgtgaacgcccgacgcccgag
cgcgagattcgcttcgtcgctcgcgagctccggactgagttggccaatggtcgcgacccc
gacgacctggccgtcgtcgttcccgggactgaggcttattcggggtacgtcgaggatacg
ttcgatacgttcgatatcccgcacgtcacgaccgacgcctcacagctgaaccggacgttc
accgggagcgtcgtccacgacctcctgaacctcgccgaaccggatccgcgggctgaggac
ctcacgtccctgtttgcgaatccactagtcaatgtcgtcgacaccgaccaagccaacgcc
gtcacggcagctgctcgccggcgtggcaccgtttctgtgtcacccctgctcgatgacgtc
gacgacgaggcggcggaactgatcgagaacctactggccacgctagagacgctccgaaca
ggcgacgtcgagggcgcaaccaagactctccgacgactgttggacgaacggttcgacctg
gagggggcgacggaggactacgccagcggcgccgagcaagccgtcgaacagcgagcctac
gacctcgtagacgaggtcctctcctcgttcgagtcgctggcggcggtcaatagcgatctc
tccccgttggcactgttcactcgtgcgttcgatggtgttccgatccgggttccgcagcgc
gctgctggcggtcacgtcgaagtgatggggttgctcgacgcccggatgcgctcgttcgag
aaggtgtttctcgtggggctgacgagcgagcacttccccgtgacgccggagcgcccggcc
ttcttcgaagaaatgaccgacgcccatccacggttcgacactggcgacgagcgcctccgg
gggcgctatctcttcgcgacgctcctggcgaacgttgacgaactcacgatcaccacacca
gagacgggcgacgacgaatccgccgtcgtccggtcgccggtcctcgacgaactccagcgc
gtgaccggcatcgaacccgaagatggcgtcgacgaccgcgtgggctcccgcgaagacctc
cagcggcacgtcgctgcaacggccgaccggcgtgcggcagtcagccgcgccggcgaccga
ggtgacctctcccccgagcagaccaagcgcacggatcggggactccactgtgcggccaac
aggggaacggctggcctctccgaccacgacggcgtgttggatcccgagacagtcgatgag
gtataccctccgtcggagcgagaaccctacagcgcgagtcggatcgagcgatacgtcgag
tgtgggttcaagttctacgccgacgaagtgctcgaaatcgaggatcccgacgacgtcgag
gtcgtccctacgcccctcgaaaccggatcgtacgtccacgacgtcctcgaacggttcttc
gcggatctacaggacgaaaccgaagatggtgtcgacctcaccgagttcgaccggaacgac
ttggcgatacaccttcgcgagattgccgtcgaagaactccgggatgctgacttcgagtac
gacggcctgttctatgaacggtggaaggcggagctgttcgcgggcctgggtgacggcgag
agtgctccgtacgaggccgggagcaaacctcacgacgcaccggaacaggggttgttcgct
accttcctcgacaacgaactctcgcgggacggcgctgaccgcccacacttgttcgaggcc
ccgttcggcgagggacttcccgactcggatgctgggccgttcacagttgagcgaccggac
ggctcgactgtctcgattcggggatacatcgaccgcgttgacgtgagccagggtggcgaa
caaccgacgctcacgctctacgactacaagactggtcgagcaccgtatatgacgaagaca
accggcggcacgaagttccaactccccatttatctgcttgctgcggccaacgtcgtcgac
ggtgatctgttcgagcagggatcgctttcagcgacgtactatcaggtgcgaccccccaac
gacctcaaggttccacgcggcgtcgaatcgaagttcgattcagaggccgaactccgccgg
ttcctgaacgatgttgttccggagtggctgggccaaatcgacgaggcgatcggcaacggt
cggttccacacgaccctcctgtcggcccgcggagcgaactgccgatactgtgactaccgt
cgggcgtgcgatgtccgccatcaccgcaagcgggagttcgtcgacgaggttaacgaggac
gacgctgcgtacgttccgctccgtgttcgcgacgacgaggacatcgagacggtgatgagc
gatgactga
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