Halobacterium hubeiense: Hhub_6068
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Entry
Hhub_6068 CDS
T04202
Symbol
tfbA10
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hhub_6068 (tfbA10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_6068 (tfbA10)
Transcription machinery [BR:
hhb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hhub_6068 (tfbA10)
Prokaryotic type
Archaeal type
TFB
Hhub_6068 (tfbA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_LysW
IBR_1
Ribosomal_S27e
Cyclin_C
FtrD-like
DZR
DUF7351
Zn_ribbon_tTFIIB
IBR
VG15
C1_1
DUF7129
zf_Rg
Zn_ribbon_PADR1
DmmA-like_C
DUF8054_C
Motif
Other DBs
NCBI-ProteinID:
CQH65144
UniProt:
A0A0U5D365
LinkDB
All DBs
Position
pSTJ003:59091..60020
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AA seq
309 aa
AA seq
DB search
MTEPQENRSPKDRTNCPECGGQIRYNNSQSEVACQQCGLVIEEETIDHGPEWRSFTDEQR
QKKSRVGAPTTPLMHDKGLSTTISWQDKDARGQHLSSRKRERLRRLRRWDERFRTKDAAE
RNLKQAFDEIDRMASALGLPEAVRETAGVLYRCAVEEGLLPGRSIEGMATAALYASARQH
QTPRSPFVVETVSRVEKKRFQRAYRYLSRELKLEIEPESPDQHLPRLASTLDVTDEALRR
ARDLLDVAQQNGIHSGKSPVGMAASALYAATYLTNEKLTQETVSSAASVSKVTIRTRYQE
LLDVYAEHK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaccacaagaaaaccgcagtccaaaagatcgaacaaattgcccggagtgtggg
ggacagattcggtacaataattcacagagtgaggtagcatgtcaacagtgtgggttggtc
atcgaagaggaaactatcgaccatgggccagagtggcggtcgtttactgacgaacaacgc
cagaaaaagagccgagtcggcgcaccgacgacgccactgatgcacgataagggactcagc
acgactatcagctggcaggacaaggatgcgcgcggccaacatctgtcaagcagaaaacgg
gagcgactacgacggctccgccggtgggacgaacgattccgcacgaaagatgccgcagag
cggaacctcaaacaggcattcgacgagattgatcggatggcgtcggcactgggcttgcct
gaggcagtccgtgagacagcgggggtcctctatcggtgtgccgtcgaggaagggttactt
ccgggtcgttctatcgaagggatggcaacggctgcactgtacgcgagcgcgcggcaacat
caaacaccgagatctccgttcgtagtcgagacggtaagcagagtcgaaaagaaacgcttt
cagcgggcataccggtatctctctcgggagctcaagcttgaaatcgaaccggaatctccg
gaccagcatctaccgcggctcgcatcaacacttgacgtaactgacgaggcacttcgccgt
gcgcgagacctgctcgacgttgcccagcagaacggcatccatagtggcaaaagcccggtc
ggaatggcggcatcagcgctgtatgcggcgacgtatttgacgaacgagaaactcacccag
gagaccgtgagttcagcggcaagcgtgagcaaggtcacgattcgaactcgctatcaggaa
ctgttggacgtatacgctgagcacaagtga
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integrated database retrieval system
