Ectothiorhodospira haloalkaliphila: M911_00510
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Entry
M911_00510 CDS
T03059
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhc
Ectothiorhodospira haloalkaliphila
Pathway
hhc03420
Nucleotide excision repair
hhc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M911_00510 (uvrD)
03430 Mismatch repair
M911_00510 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhc03400
]
M911_00510 (uvrD)
Enzymes [BR:
hhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M911_00510 (uvrD)
DNA repair and recombination proteins [BR:
hhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M911_00510 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
M911_00510 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHK77931
UniProt:
W8KQT7
LinkDB
All DBs
Position
115094..117265
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AA seq
723 aa
AA seq
DB search
MDVSPLFDSLNEAQRQAVGSPSGPILVLAGAGSGKTRVLVHRIAWLIQAEGLSPHSILAV
TFTNKAASEMRGRLEGLLGMPPRGLWVGTFHGLSHRLLRAHWREARLPENFQILDSDDQY
RLVKRVLKALELDEAHWPPRKMQWFVNGRKDEGVRPAHMQDTGDPVNRQMIRFYTAYEQA
CQRAGVVDFAELMLRSLELLRDTPTLLEHYRSRFRHLLVDEFQDTNDIQYAWLRLLAGDK
TPVFAVGDDDQSIYGWRGARIEHIQKFTRDFPGALTVRLEQNYRSTATILGAANTLIRQN
GSRLGKELWTDGLQGEPITLYGAFNEYDEARFVADQLRGWREGGGACRDVAILYRSNAQS
RVLEETLIQAGIPYRVYGGLRFFERAEIKDALCYMRLVASRDDDTALERVINQPTRGLGE
RTVALIREQARAQGVSLWDAAGRLLEQGALAARAGNALRGFRVLLDDMATACANLDLHEQ
VEHVIAHSGLKDHYEAEKGEKAQARVDNLEELVSAARGFVHDPERHEDMSPLTAFLSHAA
LEAGEGEADAWEDCVQLMTLHSAKGLEFPLVFLVGMEEGLFPHRMSLEEPGRLEEERRLA
YVGITRACRRLVLTYAESRRLHGRESYNAPSRFIAELPEDLLEDVRPRATLRRPVAEPVR
TRRVKEPPAEGLTLGARVRHKKFGEGVILDCEGQASSARVQVRFDGEGVKWLVVGYAKLE
PVG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccctttgtttgattccctgaacgaggcccagcgccaggcggtgggcagc
ccctctggtccgattctggtgctggcgggcgccggcagtggcaagacccgcgtgctggtg
catcgcatcgcctggttgattcaggcggagggcctgtctccccacagcattctggcggtc
acgttcaccaacaaggcggccagcgagatgcgtgggcggctggagggtctgctgggcatg
ccgccccgggggctttgggtgggcaccttccacggcctgtctcaccgactgctgcgggcc
cattggcgcgaagccaggctgccggagaacttccagatcctggattcggacgatcagtac
cgcttggtgaagcgcgtgctcaaggccctggagctggacgaggcccattggccaccgcgc
aagatgcagtggttcgtcaatggtcgcaaggatgagggggtgcgcccggcgcacatgcag
gataccggcgacccggtgaaccggcagatgatccgcttctacacggcctatgagcaggcc
tgtcagcgtgccggtgtggtggattttgccgagctcatgctgcgcagcctggagttgctg
cgcgacaccccgacgctgctggagcattaccgcagtcgcttccgtcacctgctggtggat
gagttccaggataccaacgacatccagtatgcctggctgcgtctgctggccggggacaag
acgccggtattcgccgtgggtgatgatgaccaatccatctacggctggcgtggtgcccgc
atcgagcacatccagaagttcacgcgggacttccccggcgccctgacggtgcgtctggag
cagaattaccgctccaccgccaccatcctgggggcggccaacaccctgatccgtcagaac
ggctcgcgcctgggcaaggagttgtggacggatgggttgcagggggagccgatcacgctc
tacggtgccttcaatgaatacgatgaggcccggttcgtggctgatcagctccgcggctgg
cgggaggggggcggagcctgtcgtgacgtggccattctctatcgctccaacgcccagtcg
cgggtgctggaggaaaccctgatccaggcgggcatcccctaccgggtttacgggggcctg
cgcttcttcgagcgggccgagatcaaggatgccttgtgctatatgcgcctggtggcgtcg
cgtgacgatgacacggccctggaacgggtgatcaatcaacccacgcggggcctgggggag
cgcaccgtggcgttgatccgtgaacaggcccgggcgcagggcgtgtcgctgtgggatgcc
gctggcaggctgctggagcagggcgccctggcggcccgggccggtaatgcgctgcggggg
ttcagggtgctgttggatgatatggccactgcctgtgccaatctggatctgcatgagcag
gtggagcatgtgatcgcgcattcgggtctcaaggatcattacgaggcggagaagggggag
aaggctcaggcgcgggtggataacctggaggagctggtgagtgctgcccgcggttttgtc
catgatccggagcggcatgaggacatgagtccgctgacggcgttcttgtcccatgcggcc
ctggaggcgggcgagggtgaggcggacgcctgggaggattgtgtgcagttgatgacgctg
cattcggccaagggtctggagtttcctctggtgtttctggtgggcatggaggaggggttg
tttccgcaccggatgtcgctggaggagccgggtcggctggaggaggagcggcgtctggcc
tatgtggggatcacgcgggcctgccgtcggctggtgctgacgtatgcggagagtcggcgt
ctgcatggtcgggagagttataacgcgccttcgcggttcattgcggagttgccggaggat
ctgctggaggatgtgcgcccgcgggcgacgctgcggcgaccggtggcggagccggtgcgg
accaggcgggtcaaggaaccgccggcggagggcttgaccctgggggcgcgggtgcggcac
aagaagttcggtgagggggtgatcctggattgtgagggtcaggcttcttcggcgcgggtg
caggtgcggtttgatggtgagggcgtcaagtggttggtggtggggtatgcgaagctggag
cctgtagggtga
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