Ectothiorhodospira haloalkaliphila: M911_01015
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Entry
M911_01015 CDS
T03059
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hhc
Ectothiorhodospira haloalkaliphila
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhc03400
]
M911_01015
Enzymes [BR:
hhc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M911_01015
DNA repair and recombination proteins [BR:
hhc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M911_01015
Prokaryotic type
M911_01015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
AraA_N
Motif
Other DBs
NCBI-ProteinID:
AHK78012
UniProt:
W8KM03
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All DBs
Position
215188..216756
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AA seq
522 aa
AA seq
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MSAPIHLVWFKRDLRVDDHVPLCQAAKNGPVLPLYIVEPGYWDEPDTSRRHWGFIRASLS
DLDRGLRELGQPLIVREGEAGTVLDRLCEELPIEAVHSHQETGNGWTFNRDRAVARRLRE
RGIPWHEYRQHGVVRPLRSRDGWAAQWEQLMGEPVAALPESLTPCHGVVGGIETLPDCPA
GVAADLPIPLQTPGLEAGHAVLGDFLGARGQRYPGGISSPEKAWTASSRLSPHLAYGTLS
LRRVLQATRERKAQVGEVPAGDRQRTAWQRSLRQFEERLHWHCHFMQKLEDQPSIEFANL
HRACDGLREDAFDVERMRLWQQGLTGYPLVDACMRALNDHGWINFRMRAMVVAFASYHLW
LHWREPSLHLARVFADYEPGIHYSQMQMQSGTTGINALRIYNPVKQSVDQDPEGRFIRKW
VPELARVTGDWIHQPWRMPAALQREFGCRIGHDYPAPIVDHEQAAREARARFKGVRGKAA
SRQERDGIQQRHGSRRRPSARTTTRRTPPAHGQLDLFPETDR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgatacacctggtctggttcaaacgtgatcttcgcgtcgatgatcatgtc
ccgctctgccaggcagcaaagaatgggcccgtgttgccactgtatatcgtggagccgggc
tattgggatgagccggataccagtcgtcggcactggggtttcattcgcgccagcctgagt
gatctggaccggggcttgcgcgagctcgggcaaccgctgatcgtacgtgaaggagaggcc
ggcacggtgctcgaccggctgtgcgaggaactgccgattgaggcggtccatagtcaccag
gagaccggtaatggctggaccttcaatcgggatcgggcggtcgcccgccgactgcgggag
cgcggcatcccctggcatgagtatcgtcagcatggcgtggttcgcccgctccgtagccgc
gatggctgggcggcgcaatgggagcaattgatgggcgagcctgtggccgcactccccgaa
tcgctcacaccctgccatggggtggtgggcggcatcgagaccttgccggattgcccggcg
ggcgtggcggcggatcttcccataccgcttcagacgcccgggctggaggccggtcatgcc
gtcctgggggacttccttggggcgcgcggccagcggtatcccggcggcatcagcagcccg
gaaaaggcctggacggccagttcacggctgagcccgcacctggcctatggcacgctgtcg
ctgcgtcgggtgttgcaggccacccgggagcgcaaggcccaggtgggtgaggtgcctgcc
ggggatcgccaacgcacggcctggcagcgctccctgcgtcagttcgaggaacggttgcat
tggcactgccacttcatgcagaagctggaggatcagccctccatcgagtttgccaatctg
caccgtgcctgtgacggtctgcgcgaggacgcgttcgacgtggagcgcatgcggctctgg
cagcagggcctgacgggatatcccctggtggatgcctgcatgcgtgcgctaaacgaccat
ggctggatcaatttccgcatgcgcgcgatggtggtggccttcgcctcctatcacctctgg
ttgcactggcgcgagccgtcactgcacctggcccgggttttcgccgactacgagcccggc
attcactacagtcagatgcagatgcaatccggcaccacgggcatcaacgccctgcgcatt
tacaatccggtgaagcagtcggtggatcaggacccggagggtcgtttcattcgcaaatgg
gtgccggaactggcgcgggtgacgggggactggatccaccagccatggcgcatgccggcg
gcgctgcagcgtgagtttggttgtcgcatcggccacgactatccggcgcccatcgtggat
catgagcaggcggcgcgagaggcccgcgcgcgcttcaaaggggtacgtggcaaggcggca
tcgcgtcaggagcgtgacggcatccaacagcgccatggtagccgtcgccgaccctctgca
cgcaccaccacccgacgcaccccgcccgctcacgggcagctcgatctcttccccgaaacg
gaccgctga
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