Ectothiorhodospira haloalkaliphila: M911_04220
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Entry
M911_04220 CDS
T03059
Name
(GenBank) restriction endonuclease
KO
K19789
DNA repair protein RadD
Organism
hhc
Ectothiorhodospira haloalkaliphila
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhc03400
]
M911_04220
DNA repair and recombination proteins [BR:
hhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
M911_04220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
Helicase_C_2
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AHK78524
UniProt:
W8KFG0
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All DBs
Position
869222..870841
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AA seq
539 aa
AA seq
DB search
MALQTLLRNAKASALREVIGPSIVDTLRGLDPELDSGTRLGELAVNLVEPSEALRDPEMR
SRIIRMLPLSKARELGGHLGAKDGRTLYDDLCVAAADSAALAVLYSFFGVVRDVRAPADS
APDATKASAGYALFDHQRAAAERVVHALGDAPRKVILHMPTGAGKTRTAMHIVAEHLRRS
EPTVVCWLAQNAELLDQAAGEFENAWKFLGNRETALVRFWGHRRPDVLDIQDGVIVSGLA
KMSALDNRDAATLLRLADRVSLTIIDEAHQAIAPTYAAILTALYSKRPHNALLGLTATPG
RSWSDIGEDRKLSDYFDGRKVTLEVEGYDDPVTFLIDQKYLARPTFRTLNSDAGLTLSEN
DVNALSSAIDVPEQILERLGTDTQRNLKILSAVEDLMTRHRRVIVFAPSVENARVLTAIL
SIRGHEAFVVTGQSNTAERERVIRRFKSKDNRAMVVVNYGVLTTGFDAPATSAAVIARPT
RSLVLYSQMVGRATRGTRAGGNDEAEIVTVVDPHLPGFGSVADAFKNWEDVWDEPDRSC
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcccttcaaaccctgttgcgcaacgccaaggcatctgcgttgcgcgaggtgatcggt
ccgtcgatcgtggatacgcttcgggggctcgaccccgaactggactccggcacccggctc
ggggagcttgccgtcaaccttgtcgaaccctccgaagcgttgcgcgacccggaaatgcgc
agccgcatcatccgcatgctgcccttatccaaggcgcgcgagctgggcgggcatctcggc
gcgaaagacggccgcacgctatacgacgatctctgcgtcgccgccgccgattctgcggcg
ctggctgtgttgtactcgttcttcggcgtggtccgggacgttcgcgcgccggcagactcg
gcgccggacgccacgaaggcatccgccggatacgcgctgttcgatcaccagcgtgccgct
gccgagcgtgtggtgcatgcgcttggcgacgcgccgcgcaaggtcattcttcatatgccg
acaggcgcgggcaagacccgcacggccatgcacatcgtggcggaacatctgcgccggagc
gagccgaccgtcgtctgctggctcgcccagaatgccgaacttctggaccaagccgcgggc
gagttcgagaatgcatggaagtttctcggtaatcgggaaaccgcactcgtccgcttctgg
ggacacaggagaccggatgttctcgacatacaggacggtgtgatcgtttccggcctcgcc
aagatgtcggcgctcgacaaccgcgatgccgcaaccctgttgcgtctggccgaccgcgtc
tcgttgacgattatcgacgaggctcaccaggcgattgcgccgacatacgcggcgatcctt
acggccctctacagcaagcggccgcacaacgccttgctgggcctcacggcgacgcccgga
cgaagctggtcggatatcggcgaggaccgcaagctttcggattatttcgacggccgtaag
gtcacgctcgaagtcgaaggttacgacgaccccgtcactttcctgatcgaccagaaatat
cttgcgcgcccaaccttccgcacactaaattccgatgcggggctcacgctgagcgagaac
gatgtcaatgcgctctcatccgcgatcgacgtgccggaacagattctggagcgtctgggt
acggacacgcagcgcaacctgaaaatcctgtccgcagtcgaagacctgatgacgcggcat
cgccgcgtcatcgtattcgcgccatcggtggagaacgcgcgcgtgcttacggcgatcttg
tccatacgcggacatgaagcatttgttgtaaccggtcaaagcaatacagcggaacgcgaa
agagtaatcaggcgtttcaaaagtaaagataatcgcgctatggtggttgtaaactacggt
gtgttgaccaccggattcgacgcgcccgcgacgagtgcagccgtcatcgcgcgcccgaca
cggtcgcttgtgctttacagccagatggtcggcagggcgacgcgcggcacgcgggccggt
ggaaatgacgaggccgagattgtaacggttgtcgatccgcacttgcctggctttggcagc
gtggccgacgcattcaagaactgggaggacgtttgggatgagcctgacagaagctgctga
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