Ectothiorhodospira haloalkaliphila: M911_05430
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Entry
M911_05430 CDS
T03059
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hhc
Ectothiorhodospira haloalkaliphila
Pathway
hhc03030
DNA replication
hhc03430
Mismatch repair
hhc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M911_05430
03430 Mismatch repair
M911_05430
03440 Homologous recombination
M911_05430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhc03032
]
M911_05430
03400 DNA repair and recombination proteins [BR:
hhc03400
]
M911_05430
Enzymes [BR:
hhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M911_05430
DNA replication proteins [BR:
hhc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M911_05430
DNA repair and recombination proteins [BR:
hhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M911_05430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AHK78705
UniProt:
W8L477
LinkDB
All DBs
Position
1105638..1109177
Genome browser
AA seq
1179 aa
AA seq
DB search
MTPSFVHLHLHSEFSLVDGLVRVGALVDTARANGMPACAVTDQNNLFGMVKFYKAALKAG
VKPLIGADAWVTAPQPGEPPTRLVLLCQDNEGYGNLTRLISRGYQEGQQSGAPILERDWF
TPETCRGLIALSGAREGEVGRALLSSQPDMAPPLCDHWAGLFPGRFYLELVRTGREGEED
YLHAAVELAATRGLPVVATNDVRFLKAEDFDAHEARVCIHDGRVLDDPRRPRLYSRQQYL
RTPEEMAELFSDVPEALENTVEIARRCNLTLTLGENYLPQFPIPDGMTTDEYFRSESRKG
LEQRLVRLVAEDDPDREARIQTYKDRLEVELDVICQMGFPGYFLIVADFIQWAKDNGVPV
GPGRGSGAGSLVAYALKITDLDPIRYELLFERFLNPERVSMPDFDVDFCMEKRDSVIEYV
ARRYGREKVSQIITYGTMAAKAVVRDVGRVLGHPYGFVDRIAKQIPMEIGMTLDKALEQE
EDLRQSYQDDEEVRDLIDLALKLEGVARNAGKHAGGVVIAPTTLTDFSPLFCEPGGQGVV
THFDKDDVEAIGLVKFDFLGLRTLTIIDWAVHNINARRRENGEDLLDINDVSLEDPDTFS
LLKRQETTAVFQLESRGMKDLIKRLEPDDFEDIIALVALYRPGPLQSGMVDDYINRKHGR
AKVEYPHPALEPILKPTHGVILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMAKQ
REIFQKGAVEQGVEADTATYIFDLMEKFAGYGFNKSHSAAYALLSYQTAWLKCHYPAAFM
AAVLSADMDHTDKIVNLIDECRSMNLEVIPPDVNASSYEFTVRDARTIVYGLGAIKGVGE
SAIQVILDSRNQGGSFSSLDDLCMRADSQKINRRTLEALIRAGALDSIGPNRATLMHTLP
QALSRAEQYLRDQSMGQEDLFGDLVAPTPEVTATEQWPEWDEESRLLAEKETLGLYLTGH
PIIRYEAELAQITGKRIADLLSDLADSAPGNGGGNGGGNGEGGGYGRGRQREQTVIVAGL
VVAIRTRNGNSGRMAFLTLDDRSGRVEVGLFGDDYKRYQSLLVKDRLLVVEGSAGIDEFS
GNVRMRCRQIMDLDQAREQFAKRVELSVNGKASPGLLEGLHAHLEPFSEGPCPIYLSYCN
DQASARFRLGARWQVRPSEELIHRLRELLGEESVRIVYR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgacacccagttttgttcatctccatctgcattccgaattctccctggtggacggcctg
gtgcgcgtcggtgccctggtggataccgcgcgggccaacggcatgccggcctgtgcggtc
acggaccagaacaacctctttggcatggtcaagttctacaaggccgcgctcaaggccggg
gtgaagcccctcattggcgccgatgcctgggtgacggcaccgcagcctggagagccaccc
acgcgtctggtcctgctctgccaggacaacgaaggctatggaaacctcacgcgcctgatc
agccggggttatcaggaaggccagcaaagcggtgctcccatcctggagcgagactggttc
accccggagacctgtcgcggattgatcgccctgtccggcgcgcgcgagggggaagtgggt
cgcgccctgctgtccagccagccggacatggccccgcccctgtgcgatcactgggcaggg
ctttttccggggcgcttctacctggaactggtccgcaccgggcgagagggcgaggaggat
tacctgcacgcggcggtggaactggctgccacccgtggcctgccggtggtggccaccaac
gatgtgcgcttcctcaaggccgaggatttcgacgcccatgaggcccgtgtgtgcatccac
gatggccgggtgctggacgatccgagacggccacgtctgtacagtcggcagcagtatctg
cgcaccccggaagagatggcagagctcttcagcgatgtgccggaagcccttgaaaataca
gtggagatcgccaggcgctgcaacctcacgctgaccctgggggaaaactatctaccccag
ttccccatccctgacgggatgaccaccgacgagtattttcgcagtgagtcccgcaagggg
ctggagcagcgcctggtccgtctggtggccgaggatgatccggatcgggaggcccgcatc
cagacctacaaggaccgtctggaggtggagctggacgtgatctgccagatggggttcccc
ggctacttcctgatcgtggcggatttcatccagtgggccaaggacaacggcgtgccggtg
ggcccggggcgtggctccggggcgggctccctggtggcctatgccctgaagattaccgac
ctggatccaatacgttatgagcttctctttgagcgttttctgaatccggagcgggtgtcc
atgcccgacttcgatgtggacttctgcatggagaagcgggacagcgtcatcgagtacgtg
gcccgtcgttatggtcgggaaaaggtctcgcagatcatcacctacggcaccatggcggcc
aaggcggtggtgcgcgacgtcggcagggtcctgggacatccctacggctttgtggaccgg
atcgccaagcagatccccatggagatcggcatgaccctggacaaggccctggagcaggag
gaggacctgcgtcagagttaccaggatgacgaggaagtccgcgatctcatcgacctggcc
ctgaaacttgaaggggtggctcgcaatgccggcaagcacgctggcggcgtggtcatcgcc
cccaccacgctcacggacttctcgcccctgttctgcgagccgggcgggcagggggtggtc
acccacttcgacaaggacgatgtggaggccattggtctggtgaagttcgacttcctgggc
ctgcgcaccctgacgatcatcgattgggcggtgcacaacatcaatgcccggcgcagggaa
aacggcgaggatctgctggacatcaacgatgtctccctggaggacccggataccttcagc
ctgctcaagcgccaggagaccacagcggtcttccagctggaatcccggggcatgaaggat
ctcatcaagcgcctggaacccgatgattttgaagacatcatcgcgctggtggccctctac
cgccctggcccgctgcaatcgggcatggtggatgactacatcaaccgcaagcacggccgg
gccaaggtggaatacccccacccggccctggagcccatcctcaagcccacccatggggtg
atcctctaccaggaacaggtgatgcagatcgcccaggtgctggctggctacagcctgggc
ggcgctgacctgctgcgtcgagccatgggcaagaaaaagcccgaggagatggccaagcag
cgggagatcttccagaagggcgccgtggagcaaggggtggaggcggacaccgccacctac
atcttcgacctgatggagaagttcgccggttacggattcaacaaatcccactcggcggcc
tatgcgctgctctcctaccagactgcctggctcaaatgccattatccggcggccttcatg
gcggcggtgctctccgccgacatggatcacaccgacaagatcgtgaatctcatcgacgag
tgtcgttccatgaatctggaggtgatcccgccggacgtgaatgcctccagctacgagttc
accgtgcgcgatgcgcgcaccatcgtttacgggctgggcgccatcaagggcgtaggggaa
tcggccattcaggtgatcctggacagtcgtaaccagggcgggtcgttcagcagcctggat
gacctgtgcatgcgcgccgactcccagaagatcaaccggcgcaccctggaggccctgatc
cgcgctggcgccctggattccatcggccccaatcgggccacgctgatgcacacactgccc
caggcgctgtcccgcgccgagcaatacctgcgggatcagagcatggggcaggaggacctg
ttcggggatctggtcgccccgacaccggaggtgacggcgaccgagcaatggccggaatgg
gacgaagagagtcgcctgctggcggaaaaggaaaccctgggcctgtacctcacggggcat
cccatcatccgctatgaggccgaactggcgcagatcaccggcaagcgcatcgccgatctg
ctcagcgacctggccgacagcgcccctggcaatggtggcggcaatgggggtggcaacggc
gagggcggtggttatggccggggtcggcagcgggagcagaccgtgatcgttgccggtctg
gtggtggccatccgcacccgcaacggcaactccggacgcatggccttcctcaccctggat
gaccgcagcggccgggtggaggtgggtctgttcggcgacgactacaaacgctatcagagt
ctgctggtcaaggaccgactgctggtggtggagggcagtgccggcatcgacgagttcagt
ggcaatgtgcggatgcgctgccgtcagatcatggacctggaccaggcccgcgaacagttt
gccaaacgtgtggagttgtccgtgaacggcaaggccagtccgggccttctcgaggggctg
cacgcgcatctggagccgttcagcgagggaccatgccccatctacctgagttactgcaac
gaccaggccagtgcgcgctttcggctgggggcccgctggcaggtgcgccccagtgaggaa
ctgattcatcgcctgcgagagctgctgggggaggagtcagtgcggattgtctaccggtga
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