Ectothiorhodospira haloalkaliphila: M911_07100
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Entry
M911_07100 CDS
T03059
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hhc
Ectothiorhodospira haloalkaliphila
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhc03016
]
M911_07100
Enzymes [BR:
hhc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M911_07100
Transfer RNA biogenesis [BR:
hhc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M911_07100
Prokaryotic type
M911_07100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHK78957
UniProt:
W8KPL6
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All DBs
Position
1447475..1448500
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AA seq
341 aa
AA seq
DB search
MNVFISTDPNAPLIKARLRATPADFQVDELPITTPEGEGEHVWLHLRKTGLNTDQLAGML
ARAASVPRRAVSYAGLKDRHAVTTQWFSVHLPGCDAPEWSDHLPPEVEILTAHRHRRKLQ
TGHLRGNRFQIRLRDCKGDREATEARLQAIAHRGLPNFFGEQRFGHDRGNLDKARALFSG
EIRVRDRKLRGLYLSAARSEIFNRVLARRVEEDHWDRAMPGDAMQLDGSRSFFIHREEDP
TVLERVTAFEIHPTGPLWGQGDGITEGMAARLEAEVMEAADLIELARGLEGAGLSQERRA
LRIRVKELTWSWLDEADLELRFELPAGAYATTVIKAVADTA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcttcatcagcaccgaccccaatgcccctctgatcaaggcgcgcctgcgtgcg
acgccggccgattttcaggtggacgaactgcccatcaccacgcccgagggggagggcgag
catgtctggctgcatctgcgcaagacgggtctcaacacggatcaactggcgggcatgctc
gcccgcgcggcaagcgttccgcggcgggccgtgagttacgccgggctcaaggatcgccat
gcagtgactacccagtggttcagtgtccacctgcccgggtgtgacgcccccgagtggtct
gatcatctgccacctgaagtggagatcctcactgcccatcggcatcgtcgcaagctccag
acggggcatcttcgcggcaaccggtttcagatccggctacgcgactgcaagggggaccga
gaggcgacggaggcaaggctgcaggcgattgcccatcgaggtctgccgaactttttcggg
gaacagcgttttggccatgatcgtggcaacctggacaaggctcgcgcactgttctcaggg
gagatccgcgtacgcgatcgcaagctcagggggctgtacctctcggcggcccgctcggag
atcttcaatcgggtgctggcaaggagagtggaagaggatcactgggatcgggcaatgccc
ggagatgcaatgcaactggatggctctcgcagtttcttcatccaccgggaggaggatccc
acagtgttggagcgggtgaccgccttcgagatccaccccaccggtccgctatgggggcag
ggggatggcatcacagaggggatggcagcacggctggaagccgaggtgatggaggccgcg
gatctgatcgaactggcccgtggcctggaaggcgccggcctgtcccaggaacggcgtgcc
ctgcgcatccgtgtgaaagagctgacctggtcgtggcttgatgaggcagatctggaactg
cgcttcgaactgcccgccggtgcctatgccaccacggtcatcaaggccgtggcggatacg
gcttaa
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