Ectothiorhodospira haloalkaliphila: M911_07420
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Entry
M911_07420 CDS
T03059
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hhc
Ectothiorhodospira haloalkaliphila
Pathway
hhc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M911_07420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhc03019
]
M911_07420
03400 DNA repair and recombination proteins [BR:
hhc03400
]
M911_07420
Enzymes [BR:
hhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M911_07420
Messenger RNA biogenesis [BR:
hhc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M911_07420
DNA repair and recombination proteins [BR:
hhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M911_07420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
DDE_Tnp_Tn3
Motif
Other DBs
NCBI-ProteinID:
AHK79011
UniProt:
W8KTV1
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All DBs
Position
complement(1518740..1520548)
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AA seq
602 aa
AA seq
DB search
MDDQPLDILRSTFGYEQFRPPQDQVIDTLMQGGDALVLMPTGGGKSLCYQIPAMALPGTG
VVVSPLIALMQDQVAALRQAGVRAAYLNSTLHWEEVQEVERALLRGELDLLYVAPERLLN
ERTLALLKRARISLFAIDEAHCVSQWGHDFRPEYIKLSLLAEHWPDIPRIALTATADERT
RQEIRQRLGLDQARVFISGFDRPNIRYRITQSSSNARRDLLRFIEQTHPDEAGIVYCLSR
KRVDEIADWLCDQGLTALPYHAGLSAQVREAHQRRFLNEEGVIVVATIAFGMGIDKPNVR
FVAHLNLPKSIEAYYQETGRAGRDGLPADAWMSYGLQDVITLRQMVDSSEADESHKRVER
HKLDAMLGLCEMTTCRRQALLSYFGETESEPCGNCDTCLEPPETWDATVPAQKALSCVHR
TGQRFGVNYLVDVLRGKDDARIKQFGHDRVSVFGIGSDLGVNEWKGIFRQMIARGLLTVD
LEGHGGLHLNEACRPVLRGEMQLMLRKEVRPSRAPREPRRTAAAGLDSPEDQRLFEALRA
CRRRLADDQGVPPYVVFHDATLMEMAEMRPESLRAMAAISGVGERKLEAYGEEFLEVILR
FE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaacccctggatatcctccgatccaccttcggctacgagcagttccgcccg
ccccaggaccaggtgatcgacaccctcatgcagggcggcgatgccctggtgctgatgccc
acggggggcggcaagtccctgtgctatcagatccccgccatggccctgccgggcacgggc
gtcgtcgtgtcccccttgattgccctcatgcaggatcaggtggctgccctgcgccaggcg
ggggtgcgtgcggcctatttgaactccaccctgcattgggaagaggtccaggaagtggaa
cgggctctgctgcgtggcgagctggatctgctctacgtggcccccgaacgcctgctcaat
gagcgcaccctggccctgctcaagcgggcgcgcatcagcctgttcgccatcgacgaggcc
cattgcgtgtcccagtggggccatgatttccggcccgaatacatcaagctctccctgctg
gccgagcactggcccgacatcccccgcatcgccctcaccgccactgccgacgagcgcacc
cgtcaggagatccgtcagcgcctgggtctggaccaggcccgggtgttcatcagcggcttc
gaccgccccaatatccgttaccgcatcacccagagcagcagcaatgcccgccgggacctg
ctgcgcttcatcgaacagactcacccggacgaggcgggcatcgtctactgcctgtcccgc
aagcgggtggatgagatcgccgactggctctgcgatcagggactgaccgcgctgccctac
cacgcgggcctgagcgcccaggtgcgcgaggcccatcaacggcgctttctcaacgaggaa
ggggtgatcgtggtggccaccatcgccttcggcatgggcatcgacaagcccaatgtgcgc
ttcgtggcccacctgaacctgcccaagagcatcgaggcctattaccaggagacggggcgc
gcgggccgcgatggcctgccggcggatgcctggatgagttacggcctgcaggatgtgatc
accctgcggcagatggtggacagctccgaggcggacgagagccacaagcgggtggagcgc
cacaagctggacgccatgctgggcctgtgcgagatgaccacctgccggcgccaggccctg
ttgtcctattttggcgaaacggaatccgagccctgcggcaactgcgacacctgcctggaa
ccccccgagacctgggatgccaccgtgcccgcccagaaggcgctctcatgcgtgcatcgc
accgggcagcgtttcggggtgaactacctggtggatgtgctgcgcggcaaggacgatgcc
cgtatcaagcagttcggccatgatcgcgtgagcgtcttcggcatcggcagcgacctgggc
gtgaacgagtggaaggggatttttcggcagatgatcgcccggggcctgctcacggtggac
ctggaaggccacggcggcctgcatctcaacgaggcctgccggccggtgctgcggggggag
atgcagctgatgctgcgcaaggaggtgcgcccttctcgtgcacccagggagcctcggcgc
acggcggcggccggtctggacagccccgaggatcagcgcctgttcgaggccctgcgcgcc
tgccgtcgtcggctggcggacgatcagggggtgccaccgtatgtggtgtttcatgatgcc
acgttgatggagatggcggagatgcgaccggagagcctcagggccatggcggcgatctcc
ggcgtgggggagaggaagctggaggcttatggagaggaattcctggaggtgatcttgagg
tttgagtaa
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