Ectothiorhodospira haloalkaliphila: M911_08340
Help
Entry
M911_08340 CDS
T03059
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hhc
Ectothiorhodospira haloalkaliphila
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhc03032
]
M911_08340
03036 Chromosome and associated proteins [BR:
hhc03036
]
M911_08340
03400 DNA repair and recombination proteins [BR:
hhc03400
]
M911_08340
DNA replication proteins [BR:
hhc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M911_08340
Chromosome and associated proteins [BR:
hhc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
M911_08340
DNA repair and recombination proteins [BR:
hhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
M911_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
CATASP
Motif
Other DBs
NCBI-ProteinID:
AHK79163
UniProt:
W8KJ45
LinkDB
All DBs
Position
1725298..1725606
Genome browser
AA seq
102 aa
AA seq
DB search
MTKSELIDILARKQSHLAYKDVELSVKTILEQMSQALATGDRIEIRGFGSFSLHFRPPRV
GRNPKTGETVSLPGKYVPHFKPGKELRERVNEPEKPDKVAIR
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcggaactcatcgatatactagctcgcaaacaaagccatctcgcgtacaaa
gatgtcgagctgtctgtgaagaccatcctcgaacagatgagccaggccttggcgactggg
gatcgcatcgaaatccgtggtttcggaagtttttccttacacttccgcccgccacgggtg
gggcgcaacccgaagacgggcgagaccgtgtctcttcccgggaagtacgtgccccatttc
aagcctggcaaggaactgcgggagcgggtgaacgagccggaaaagcctgacaaggtggcg
atccgctga
DBGET
integrated database retrieval system
