Halobacillus halophilus: HBHAL_1481
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Entry
HBHAL_1481 CDS
T02031
Name
(GenBank) exonuclease domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03030
DNA replication
hhd03430
Mismatch repair
hhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBHAL_1481
03430 Mismatch repair
HBHAL_1481
03440 Homologous recombination
HBHAL_1481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhd03032
]
HBHAL_1481
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_1481
Enzymes [BR:
hhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBHAL_1481
DNA replication proteins [BR:
hhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBHAL_1481
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBHAL_1481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
PKcGMP_CC
RNase_H_2
PH_3
Motif
Other DBs
NCBI-ProteinID:
CCG43853
UniProt:
I0JI85
LinkDB
All DBs
Position
496207..496929
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AA seq
240 aa
AA seq
DB search
MNPFMQFVKDVSGRLGSGFSSLNRNDPSKEAYIRNLERQLKNKDDLDVPFDELNVVVFDL
ETTGFYPYKGDEILSIGAVKVEGTNIIEEETFYSLVYSESGPSKEIEDLTGITSDMLIEA
EPLREVLHDFYSFIRSDVLVAHHANHEKQFMNHATWLALRKNFQHRIVDTTFLTRIAHQE
KKLVSLDDCCKHYGIAIDQRHHALDDAMATAKLWVESIQDIKQMGYTNLGDVYTHLATLE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttttatgcaatttgtaaaggatgtttcaggtcgcctggggagcggcttttca
tccttaaatcgaaatgacccttctaaagaagcttatataagaaacttggagcggcagtta
aaaaacaaagatgacctggatgttccgtttgatgaattaaatgttgtggtgtttgatttg
gaaacgaccgggttttatccttacaaaggtgatgaaattttatccataggcgctgtaaaa
gtagaagggactaacattattgaagaagaaacattttactccctcgtttatagcgaatca
ggtccttcgaaagaaatagaagatctaactgggatcaccagcgatatgctgatagaagcg
gaacctcttcgagaggtacttcatgacttctattcttttattagaagtgatgtactcgtg
gcccatcacgcgaatcacgagaagcagtttatgaatcatgccacgtggctcgctttgaga
aaaaattttcagcaccgcattgtagataccacttttttaacccggattgctcaccaggaa
aaaaaactggtcagtctggatgattgttgcaaacattatggcattgctattgaccagcgt
catcatgctttggatgatgcaatggcgacagcgaagctatgggtggaaagtattcaggac
atcaagcaaatgggttacacaaatttgggagacgtttacacgcatctcgcgactttagag
taa
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