Halobacillus halophilus: HBHAL_1677
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Entry
HBHAL_1677 CDS
T02031
Name
(GenBank) UvrD/REP helicase family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03420
Nucleotide excision repair
hhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HBHAL_1677
03430 Mismatch repair
HBHAL_1677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_1677
Enzymes [BR:
hhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HBHAL_1677
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBHAL_1677
MMR (mismatch excision repair)
Other MMR factors
HBHAL_1677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
nSTAND3
AAA_22
AATF-Che1
Motif
Other DBs
NCBI-ProteinID:
CCG44044
UniProt:
I0JIS6
LinkDB
All DBs
Position
685419..687614
Genome browser
AA seq
731 aa
AA seq
DB search
MTKDFFEFMEETTGVRLNDVQRQAVLHTDGPLLLLASPGSGKTTTLNMKIGYLLLEKKVR
ADRIMAITFSKASAGDMSERFDRFFSGLTNEKVHFSTIHSFAFQVVREYLRKKSQDFQLI
EGQVPQDEWKKGWDGPEVPLHKKFILKKIYEDTNGTQMTDDEMDELMTYISFVKNRMASG
KELDKITCTVKNAVSIYQAYERFKKNHSAQLLLDFDDMLTYCYQYLLDDAVILSKYQKKF
EYLLTDESQDNSVVQHEIVKLLSQPQNNLCVVADDDQSIFMWRGSDVTKLLQFEKEYPGA
TVMTMSQNYRSSQEIVQASNQFIKRNQNRYPKEMFTSNSSDQPVAIKTMHHYEDQLKYVT
EEIKKSGVSEEVAVLYRNNASAVPLADKLDKAGVHFYMKDIDPKFFKHWIVEDMLNFMRF
SYNDRRIDILERIHMKFNAYISKRQIAYLKKMSIETSIFDTLLESELPSYQKKAIPKAQK
LFQSINQMPPDQAIRTIREKLGYDHAIKKMCEKFGFNAEHLFGIIDTLEKIAEGLGTLKD
FANRLKELEHLVQTSKFNKNKSNLTLTTFHSAKGLEYDKVYMIDLINGVVPSQNDMERYR
NKEYGPMEEAVRLFYVGMTRARTNLELLTYHYKGSERVTESIFVTNVKKIVQPAGEPSTS
KKSKYAASDLSDESLLQVDDIDLGLEVMHSAFGPGVIKEYGGDQIGIQFEEGGYKELLLD
VCLSNGLLKKL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggacttctttgaattcatggaagaaaccacgggtgtgcgtttgaatgacgtg
cagagacaagcggttctacacacggatgggccattgctcctgcttgcgtccccgggttca
gggaaaaccaccacacttaatatgaaaattggctatttattactggagaaaaaggtgaga
gcggacaggattatggcgatcacattcagtaaagcgtccgccggggatatgtcagaacgt
ttcgatcggttcttttccggcttaacgaatgaaaaagttcatttttcaaccattcacagc
tttgccttccaggtcgttcgggagtatctgcgtaagaaaagtcaggattttcagctgatc
gaagggcaggttccgcaggatgaatggaaaaaaggctgggacggtccagaggtacccctg
cataagaaatttattttgaaaaagatatatgaggatacgaacggcacgcaaatgacggat
gacgagatggacgaactgatgacttatatcagctttgtaaaaaaccggatggcttctggg
aaggaattggacaaaatcacctgcaccgttaaaaatgcggtttccatctatcaagcttat
gaacgcttcaagaaaaatcattcagcgcaactgttactggatttcgacgatatgctgacg
tattgctatcagtatttattagatgatgccgtcattttgtctaaatatcagaagaaattc
gagtatcttctaaccgatgagagccaggataattccgtggttcagcatgagattgtgaag
ctgttatcccagccgcaaaacaatctttgtgtggtagcggatgatgaccagtccatcttt
atgtggcgtgggtcggatgtgacgaaactgctgcagttcgagaaggagtaccctggagcc
acggtgatgacgatgtcgcagaattatcgctcctcacaggagatcgtccaggcttccaat
cagttcattaagcgtaaccagaaccgttatccaaaggaaatgttcacgtccaattcatcc
gatcagcctgtcgctatcaagacgatgcatcattatgaggatcagttgaagtatgtgaca
gaagagataaaaaagagtggagtgagcgaggaagtcgctgtcctctatcggaataacgct
tctgcggtgccgcttgcggataagctggataaagcgggggtccacttttatatgaaagat
attgacccgaagtttttcaaacactggatcgttgaagatatgctgaatttcatgcgcttt
tcttataatgaccgcagaattgatatcctcgaaagaatccatatgaaattcaatgcctat
atatcgaagcggcagatcgcctacttgaagaagatgtcgatagaaacgtctatttttgac
acgctgcttgagagtgagctgccttcctatcagaagaaggccattccaaaagcgcagaag
cttttccaatccatcaaccaaatgccgccggatcaagcgattcgaacgattcgggaaaag
ctcggctatgatcatgccattaaaaaaatgtgcgagaaattcggctttaatgcggagcat
cttttcggcatcatcgacacgttggaaaagatcgcagaaggactggggacgttaaaagat
ttcgccaatcgcttgaaggagctggagcatctcgtacaaacgtctaaatttaataagaat
aaaagcaatctgacgctcaccacttttcacagtgctaaagggttggagtatgacaaggtt
tatatgatcgacctcattaatggagtcgttccgtcccagaatgatatggagcgctaccgt
aacaaagagtacggccctatggaagaagcggtacgtttgttttatgtggggatgacgcgg
gccaggacgaacctggaactcctgacgtatcactataaaggcagtgagcgggtgacagag
tcgattttcgtaacaaacgtgaaaaagattgttcagcccgcgggcgaaccctcaacctct
aagaagagtaagtatgccgcatccgatttatcggatgaaagtctgcttcaggtcgacgat
attgatcttgggttagaggtcatgcacagtgcgtttggtcctggtgtgattaaagagtat
ggcggagatcagattgggattcagtttgaagagggtggttacaaggaactgcttttagac
gtttgtttgagtaacggtctgcttaagaagctgtaa
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