Halobacillus halophilus: HBHAL_3004
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Entry
HBHAL_3004 CDS
T02031
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hhd
Halobacillus halophilus
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HBHAL_3004 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhd03019
]
HBHAL_3004 (rnc)
03009 Ribosome biogenesis [BR:
hhd03009
]
HBHAL_3004 (rnc)
03036 Chromosome and associated proteins [BR:
hhd03036
]
HBHAL_3004 (rnc)
Enzymes [BR:
hhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HBHAL_3004 (rnc)
Messenger RNA biogenesis [BR:
hhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HBHAL_3004 (rnc)
Ribosome biogenesis [BR:
hhd03009
]
Eukaryotic type
90S particles
RNase
HBHAL_3004 (rnc)
Prokaryotic type
rRNA processing factors
HBHAL_3004 (rnc)
Chromosome and associated proteins [BR:
hhd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HBHAL_3004 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
DUF6614
LIX1
Motif
Other DBs
NCBI-ProteinID:
CCG45351
UniProt:
I0JMI1
LinkDB
All DBs
Position
2004253..2004945
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AA seq
230 aa
AA seq
DB search
MDDFSSFQKRVNIHFQDISLLEQAFTHSSYVNEHRKTERKDNERLEFLGDAVLELGVSQY
LYREYPDMAEGELTKFRASIVCEASLVDFAKDLNFHELILLGKGEELTGGRNRPALLADV
FEAFIGALYLDQGFEEVVTFLEKYVYPKVKKGAFSHAMDFKSQLQEFIQRDKNSKIEYEI
VEERGPAHSREFIAHVRIQGEVGGIGVGRTKKEAEQRAAQKALENHGALS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttttccagtttccagaagagagtcaatatccacttccaggatatctcgtta
ctggaacaagctttcacacattcatcttatgtgaatgagcatcgtaaaacggagcgcaag
gataatgagcgtctggaatttttaggtgatgctgttttggaattaggtgtctcacaatac
ttgtatcgggagtatcctgatatggcagaaggagagcttaccaagttccgcgcttctata
gtctgcgaagcatctcttgtagatttcgctaaagaccttaactttcatgagcttatttta
ttgggcaaaggagaggaattaacaggtggacgcaaccggccggccttgctcgctgatgta
tttgaagccttcattggtgctttgtatttggatcaaggctttgaagaggtagtaacattc
ttagagaagtatgtttaccctaaggttaaaaaaggtgctttttctcatgcgatggatttt
aaaagtcagctacaggaatttattcagcgggataaaaacagtaagattgaatatgaaatt
gtagaagaaagaggacctgcccacagcagagaatttattgctcatgttcggatccaggga
gaagttggtggaatcggggtcggcagaacaaagaaagaggcagagcagcgggctgcccaa
aaagcattagaaaatcacggagccctttcctga
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