Halobacillus halophilus: HBHAL_3475
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Entry
HBHAL_3475 CDS
T02031
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HBHAL_3475 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_3475 (xseB)
Enzymes [BR:
hhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HBHAL_3475 (xseB)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HBHAL_3475 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SHOCT-like_DUF2089-C
RHG29_45_N
DUF3496
DUF2802
TBCA
Motif
Other DBs
NCBI-ProteinID:
CCG45819
UniProt:
I0JNU9
LinkDB
All DBs
Position
complement(2445241..2445477)
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AA seq
78 aa
AA seq
DB search
MTQKEDQLSFEEAMKQLEDLVEKLETGEVPLEKAIQYYQEGMKLSKICSEKLGNVEKQMQ
QILNEHGEFESFSIQEEE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaaagaagatcagttgagctttgaggaagcaatgaaacagcttgaagatctg
gtggaaaaattggaaacgggagaagtgccgctagaaaaagccatccagtattaccaagaa
ggaatgaagctttctaaaatctgcagtgaaaaattaggaaatgtagaaaaacagatgcag
cagatcctgaacgaacacggcgaatttgaatcattctctattcaggaagaagaatga
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