Halobacillus halophilus: HBHAL_3542
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Entry
HBHAL_3542 CDS
T02031
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
hhd
Halobacillus halophilus
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhd03019
]
HBHAL_3542 (cshB)
03009 Ribosome biogenesis [BR:
hhd03009
]
HBHAL_3542 (cshB)
Enzymes [BR:
hhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HBHAL_3542 (cshB)
Messenger RNA biogenesis [BR:
hhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HBHAL_3542 (cshB)
Ribosome biogenesis [BR:
hhd03009
]
Prokaryotic type
rRNA helicases
HBHAL_3542 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCG45888
UniProt:
I0JP18
LinkDB
All DBs
Position
complement(2507373..2508692)
Genome browser
AA seq
439 aa
AA seq
DB search
MSTHKFEEFAITPVISQIIGELGFHEPTPIQREVMPAALRGESLIGQSHTGSGKTHAYLL
SLLNKIDENSSNVQFVITAPTRELAIQIHEEVKKAIQFGGKEKIWRSKLLIGGTDKQKMV
DKLSSLPPHIIVGTPGRILDMVKEEAVDLHQAKGFVLDEADLMLDLGFIEDVDQILIRMD
PDVQMLVFSATIPERLQPFLKKYLTNPSLIQIEDDKPSPESMEHRLVPLRHKNPADIIMD
ISEAIQPYLAIIFTNGKGHADELADALLSRGLEVGILHGGLSPRERKRMLKELQNLRYQY
IVATDLASRGIDIQGVSHVINAQMPKEEEFYIHRVGRTARAGLQGTAINLYKEGDLPLIQ
KLESRGLTFNFYEVKNGEWKEVNSYNERQTRERKETDLEKKARQMVRKPKKVKPGYKKKM
KKKADKNLKGLKRNQYRKK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacataaatttgaagaatttgctattacccctgtaatcagccagattattggg
gaacttggttttcatgaacctacacccatacagcgcgaagtcatgcctgctgctttacga
ggtgagagcctgattggacaatcacatactggctctggaaaaacgcacgcttatctatta
tcattgctcaacaaaattgatgagaattcttccaacgttcaatttgttattacagctccc
acaagggaactggctattcaaatccatgaagaagtaaagaaagctattcaattcggtgga
aaagagaagatttggcgctctaagctgctaattggaggtacggacaagcaaaagatggtg
gataaactatcttctctccctcctcatattattgtgggaacgccgggaagaattctggat
atggtgaaagaagaagctgtagatttgcatcaagccaaagggtttgtgctggatgaggct
gatttgatgcttgatttaggttttattgaagacgtagatcagattttaattcgtatggat
cctgatgttcaaatgttagtcttctcggctacaatccctgagcgcttgcagccgttcctc
aaaaaatatctaactaacccctcccttattcagatcgaagatgataaaccatcacctgag
tctatggagcaccgattagttcctttacgtcacaagaatccggccgatatcattatggat
atatccgaagctattcagccttatcttgctattatctttacaaatggcaaaggccatgcc
gatgaattagcggatgctttgctcagtcgcggcctggaagtgggtattcttcatggaggc
ttatcaccaagagagcggaaaaggatgcttaaagaacttcaaaatttacgataccagtat
atcgtagcgactgacttagcttctcgtggaatcgatattcagggagtcagtcatgtcatc
aatgctcagatgcctaaagaagaagaattttatatccaccgtgtaggtagaactgctcgt
gccggcttgcagggaactgccattaatctatataaggaaggagatcttcccttaatccag
aaacttgaaagcagagggctcacttttaatttctatgaagtgaaaaatggagaatggaaa
gaagttaattcctataatgaacgccagacaagagagagaaaagaaacagatcttgagaag
aaagcaagacaaatggttcgtaaaccgaaaaaagtgaaaccaggctacaagaagaaaatg
aagaaaaaggctgataaaaatttgaaaggccttaaaagaaatcaatatcgcaaaaaatag
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