Halobacillus halophilus: HBHAL_3753
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Entry
HBHAL_3753 CDS
T02031
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03030
DNA replication
hhd03410
Base excision repair
hhd03420
Nucleotide excision repair
hhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBHAL_3753 (polA)
03410 Base excision repair
HBHAL_3753 (polA)
03420 Nucleotide excision repair
HBHAL_3753 (polA)
03440 Homologous recombination
HBHAL_3753 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhd03032
]
HBHAL_3753 (polA)
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_3753 (polA)
Enzymes [BR:
hhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBHAL_3753 (polA)
DNA replication proteins [BR:
hhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HBHAL_3753 (polA)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HBHAL_3753 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBHAL_3753 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCG46098
UniProt:
I0JPM8
LinkDB
All DBs
Position
complement(2710266..2712911)
Genome browser
AA seq
881 aa
AA seq
DB search
MAEKVVLIDGNSIAYRAFFALPLLNNDKGVYTNAVYGFTTMLLKILEEDQPDHLLVAFDA
GKTTFRHETYSEYKGGRQKTPPELSEQFPVLKELLDAFGAKYYQLNQYEADDIIGTIADQ
AGQDGYEVKVISGDKDLLQLVTDRVSVSLTKKGITNVDTYDPSFMEEKMGVRPDQIIDLK
ALMGDSSDNIPGVPGVGEKTAVKLLKQFDTIDRLYDNLDQVSGKKLKEKLENHKEDAYMS
RKLVTIERHAPIEIELKDLGYQGYQSTQVSHLFKDLGFQSLLSRVQEGGIEDESEAAEPF
PDIKVEVVEDFEDDMFTGKEALVVEMLYDNYHQAAVEGIAIINESNKYVISMNNAKNSKG
FKKWAEDDKKEKWVFDAKRTVVALMRHDVNIKGIQFDLLLASYLINPAENHHDIPAISHR
MGESKVKYDEEVYGKGAKMKRPENDNDFHEHISRKADMVYKLKDTVENELKNKEQYNLYM
DLEMPLALILGRMEHRGVLVDQKRLEEMGAELESRLTAIEKDIFELAGESFNLNSPKQLG
PILFEKLNLPVIKKTKTGYSTSADVLEQLEDQHEIISSILMYRQLGKLKSTYIEGLLKVI
NEDTHKIHTRFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFIPSKENWVIFASDYS
QIELRVLAHIAQDEKLIEAFREGQDIHTQTASEVFGVAKEDVTSEMRRQAKAVNFGIVYG
ISDYGLSQSLDIPRKEAQAFIDKYLESYPGVKTYMEETVQEAKQVGYVTTFMNRRRYLPE
LTSRNFNRRNAAERTAMNTPIQGSAADVIKKAMIDLENRLAEENLEAKMLLQVHDELILE
APEEEVEQLKEVVASVMEQTVKLDVPLKVDYSYGSTWYDAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaggttgtattaattgatggaaacagcatagcctatcgggcattttttgcg
ttgcctttattaaataatgataaaggtgtgtatacgaacgcggtatatggctttactaca
atgctattgaaaatattagaggaagatcagccggaccatttattagtggcgttcgatgct
ggaaagacaactttcaggcacgaaacttatagtgagtataaaggtggacggcagaagact
cctccggaattatccgaacagtttccagttctaaaggaactccttgatgctttcggggct
aagtattatcagcttaaccaatatgaagcagatgatattattggtacaatcgctgatcag
gccgggcaggatggatatgaagtcaaagtaatttccggagataaagacctacttcaattg
gtaacggatcgggtaagtgtgagcctgacgaagaaggggattacgaatgtggatacatac
gacccttctttcatggaagaaaaaatgggggtccgtcctgaccagattatcgatttgaaa
gcacttatgggagatagttctgataatataccaggtgtgcccggcgtaggagagaaaaca
gccgtaaaactgctcaagcaattcgataccattgaccgcctttatgataatctggaccag
gtcagtggtaaaaagttaaaagagaagctggaaaaccataaagaagatgcgtacatgagc
cgcaagcttgtaacgattgagagacacgctcctatagaaatagaattaaaggatttaggt
tatcaaggatatcaatccactcaggtgagccacctgttcaaagacctgggttttcagtca
ttattgtcaagagttcaagaaggcggtatagaggacgaaagtgaggctgctgaacctttt
ccagatattaaagtggaagttgtagaagactttgaagacgacatgtttacaggtaaggaa
gccttagttgttgagatgctttacgataactaccatcaggctgctgttgaaggaattgca
attattaatgaatcaaataagtatgtgatttcaatgaataatgcaaaaaattcaaaaggt
tttaagaaatgggccgaagatgataaaaaagaaaaatgggtgtttgatgctaagcgtaca
gtggtagctcttatgcgtcatgatgtaaacattaaaggcattcaatttgatctcttattg
gcttcttatttaataaatccagcggaaaaccaccatgacattcctgctattagtcatcgg
atgggggaaagcaaagttaaatatgatgaagaggtttatggaaaaggagctaaaatgaag
cgtcctgaaaatgataacgacttccacgagcatattagcaggaaagctgacatggtgtat
aaacttaaagacacagtggaaaatgaactgaaaaataaagaacagtacaatttgtatatg
gatttagagatgccgcttgctttaattcttgggagaatggagcatagaggagttcttgta
gaccagaaacgtctagaggaaatgggcgctgaattagaaagcagactgactgctatagaa
aaagatatttttgagcttgccggagaatcttttaatttgaattctccgaaacagcttggt
cccattttattcgaaaagctgaacttgccggttattaagaaaacgaagaccgggtattcg
acctctgctgatgtgcttgaacaattagaagatcagcatgaaattatttccagtatttta
atgtatcgtcaattgggtaaactgaagtccacttacattgaaggactgcttaaagtgatt
aacgaggatactcataagattcatacgcgctttaatcaagccttaactcaaactggacgt
ctaagttcaactgaacctaatcttcaaaatatccccattcggttagaggaagggcgcaaa
attcgccaggcctttatcccttcaaaagaaaattgggttatttttgctagtgactattct
caaattgaacttcgtgtactcgcgcatattgcacaagatgagaaactgattgaggctttc
cgcgaagggcaggacatccacacgcagacagcaagtgaagtgtttggtgttgccaaggaa
gacgtgacgagtgaaatgaggagacaggctaaagcagtaaactttggaattgtttatgga
atcagtgattacggattatcccaaagtctcgatattccgcgtaaagaggctcaagctttc
attgataagtacctggagagctatccaggggttaaaacctatatggaagagacggttcag
gaagcaaaacaggtcggttacgttaccacctttatgaatagaaggagatatctccctgag
ctgaccagccgtaatttcaaccgtcgtaatgcggcagagcgtaccgctatgaacacgcct
attcaaggaagtgcggcagacgtaattaaaaaagccatgattgatctcgaaaatcgacta
gccgaagagaacttggaggcaaagatgctgctgcaagtccatgatgaattgattttagaa
gcacccgaagaagaagtggaacagttgaaagaagtcgttgcatcagtaatggaacagacg
gtgaaactagatgttccattgaaagtggattattcatatggatctacctggtatgatgca
aagtaa
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