Halobacillus halophilus: HBHAL_3768
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Entry
HBHAL_3768 CDS
T02031
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03030
DNA replication
hhd03430
Mismatch repair
hhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBHAL_3768 (dnaE)
03430 Mismatch repair
HBHAL_3768 (dnaE)
03440 Homologous recombination
HBHAL_3768 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhd03032
]
HBHAL_3768 (dnaE)
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_3768 (dnaE)
Enzymes [BR:
hhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBHAL_3768 (dnaE)
DNA replication proteins [BR:
hhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBHAL_3768 (dnaE)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBHAL_3768 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
SAS4
Peptidase_S41
Motif
Other DBs
NCBI-ProteinID:
CCG46113
UniProt:
I0JPP3
LinkDB
All DBs
Position
complement(2729284..2732634)
Genome browser
AA seq
1116 aa
AA seq
DB search
MAFTHLNVQSGYSLMKSTVKIDSLAERASELGFQALALTDEEVMSGSVAFYQACQKRGIK
PLIGMKTSLYSDGGDFPVLFLAKNYKGYQNLMRLSSYIQTQKESLPLSYMNSYKDGLLAI
IMTSSSPWAEPLSRREFSELERGLEYWKSIFSSNDLYLSIKDRDLHSERQIHQPLKEWTS
DKRLSVVAVGEVKYLKQEDASAYQALQAIEEGKRLASDAEERVQHEYLKSSDEMENLFKD
WWPEVIEQSAKITEKCDLQMSLDQQLIPSYPVPEDKSADDYLMELCYEALDEKYQQRRVV
AQERLEHELNVITSMDFSDYFLIVWDFIAYARRQGIHAGPGRGSAAGSIVAYLLNITQID
PLEYNLLFERFLNPERVNMPDIDIDFPDHRRDEVIEYVSRKYGEKHVAQICTFGTFAARS
VLRELFKVMAVDESDSAYILKHIPKGTSDGLVQIVQRSEPLKEYIRSSLPLKKLFHIAAK
LEGLPRHVSTHAAGVVISQKPLVNYTALMNGQSEVYLTQMAMGDLEKIGLLKIDFLGLRN
LTFLEKMESKIRKYENHDFSLSHIPLTDEPTFNLLKEGRTNGVFQLESQGMKSVLRRLKP
SHFEDVVAVNALYRPGPMDYIPVYINRKHEKEEIQYPHPDLKPILASTFGVLVYQEQIMQ
VAQKVAGYSLGQADLLRRAVSKKQSQVLQQQRNEFIAGALKNGYDETVAYELFDWIVKFS
NYGFNRSHAVAYSFISYHLAYLKAHYPSYFMAELINANSGDREKLAAYIREARELKVSVK
APSINRSYMSTQSEGSGIRIGLTAIKGVGYQAAQAILEERRNGAYKHLNDFCLRVISSSV
SRAVIESLIIAGAFDELNTNRASLLASIDQALEQGELFKEFQDQPGMFSEDIDMKEPVSV
DPFPILKKLAMEKELLGTYLSEHPLEYHRKSLRKKGVLSLQQSLLTSRSRKITTAAVVEA
IKEIRTKRGDPMAFMTISDETAEMETVLFPEVYRGAKTWLSEQMLIIVSGKVEERNEREQ
LLISEISKFEIESLPSETKDRLFIKLDKPKEYQALEHLTEAAKYFPGNTPVLLFRTEDRK
TYQLDENYSLNPSRECLQMLEQYFGPSSVALRRNKI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
gtggcttttactcacttaaatgttcaaagcggatatagtttaatgaagagtactgtgaaa
attgactcattggcagagagggcaagtgagctgggatttcaagcattggctttgacagat
gaagaagtgatgagtggaagtgtggcattttatcaagcctgtcaaaagcgagggattaag
ccgcttattggtatgaagaccagcttgtactcggacggaggagattttcctgtacttttt
ctggctaaaaactataagggttatcagaatttaatgagattaagttcttacatacaaaca
caaaaagagtctctgcctttatcctatatgaattcatataaagatgggctgctcgcaata
attatgacctcttcctctccctgggctgaaccactatccaggcgtgagttcagtgaactg
gaacgtgggctggagtattggaaatccattttttcatcaaatgacctctatctaagtata
aaagaccgtgatcttcattcagaaaggcagattcaccagccattaaaagagtggacttct
gataaacggctctcagtggttgctgtaggagaagttaaatatctaaaacaagaggatgca
tcagcttatcaagcgcttcaggctatagaagaagggaaaaggctggcatcagatgcagaa
gaaagagttcagcatgaatatttaaaatcaagtgatgaaatggaaaatttatttaaggac
tggtggcctgaagtcattgagcagtctgctaagattactgaaaaatgtgatcttcaaatg
tcactggatcagcagttaattccttcctatccagttcctgaagataagagcgcggacgac
tatttaatggaattgtgttatgaggcgttagatgaaaagtaccaacaaagaagagtagta
gcccaggaacgattggaacatgaattaaatgttatcacctcgatggatttcagtgattat
tttctaattgtctgggactttatagcttatgcacggcggcagggaattcatgccggacca
ggcagagggtcggcggcaggttctatcgtcgcttatcttttaaacattactcaaattgac
cctctagagtataacctattatttgagaggtttttaaaccctgaaagggtgaatatgccg
gacatagatattgactttcctgatcatagaagagatgaagtgatcgagtatgttagccgt
aaatatggagaaaaacatgtagctcaaatctgcacgtttggtacattcgctgcaaggagt
gttttaagagagttgtttaaagtgatggcagtagatgaaagcgactcggcttatatattg
aagcatattccaaaaggcacgagtgacggactcgttcagattgtgcaaaggtcggaacct
ttaaaagaatatataagaagttctcttccattaaaaaaattattccatatagccgccaaa
cttgaaggacttcctcgtcatgtttccacacatgcagcaggagttgtcattagtcaaaaa
cctttagtgaattacacagcccttatgaatggacagagtgaggtctatcttacacaaatg
gccatgggggatttagaaaaaataggcttattaaaaattgattttcttgggctgagaaat
cttacttttttagaaaaaatggaaagtaaaataagaaaatatgaaaatcatgacttttct
ctttcccatattccattaacagatgaacctacttttaacttattaaaagaaggaagaacg
aatggcgtttttcaacttgaatcacagggcatgaaaagtgttttaagaaggctaaagcct
tcccactttgaagatgttgtggctgttaatgctctttatcgaccaggtcctatggattat
atacctgtttatattaatcgaaagcatgaaaaagaagaaatacaataccctcatccggat
ttaaaaccgattttagcctctacttttggggtattggtttatcaagagcagattatgcaa
gtagcgcaaaaagttgctggctatagtctgggccaggcggatttattaagaagggcagta
agtaagaagcagtctcaggtgctgcagcagcaaagaaatgaatttatagccggggcttta
aagaatggatatgacgagacagtggcttacgaactttttgattggatcgtaaagttttct
aattatgggtttaatcgaagtcatgctgtggcgtacagctttatctcttaccatctggct
taccttaaagcccattacccctcttacttcatggcagaattaattaatgcaaatagcggt
gatcgagagaagctggctgcttatattcgtgaagctcgcgagcttaaggtttccgtgaag
gctccttccattaatagaagctacatgtccacccagagtgaaggcagtgggataaggatt
ggtttgacggccataaaaggggtgggatatcaggctgctcaggctattcttgaggaaaga
agaaatggtgcgtataaacacttgaatgatttttgtttaagagttatttccagttcagtc
agccgtgctgttattgaatcactcattatagcgggagcatttgatgaactcaatacgaac
cgggcaagtctgcttgcaagtattgaccaagcccttgagcaaggggagctttttaaagaa
tttcaggatcagccaggtatgttcagtgaagatatagatatgaaggaaccggtaagcgta
gacccgtttccaattttaaaaaaattagccatggaaaaagagttgcttggaacgtatcta
tccgagcacccgctggaataccatcgcaaatctcttcgtaaaaaaggggttctatcctta
cagcaatcattattgacgagcagatcccggaaaatcacaacggccgccgtagtagaagct
ataaaagaaattagaacaaaacggggagatcctatggcatttatgacgattagtgatgaa
acagcggaaatggaaactgtgctctttccagaagtctacagaggtgcaaaaacttggttg
tctgaacaaatgctgatcatcgtctcagggaaagtagaagaaagaaatgaacgtgagcag
ctgctcatttctgaaatttccaagtttgagatcgaaagtttgccctcggaaacaaaggat
cgtttgtttattaagttggataaacccaaggaataccaggcattggagcacttaacagag
gctgcaaagtatttcccgggtaatacccctgtattgttattcaggacagaagatagaaaa
acctatcagctggatgaaaattattccttgaatccatccagagaatgtcttcaaatgctg
gagcaatattttggaccttcctcagtggctctgcgtcgcaacaagatatga
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integrated database retrieval system
