Halobacillus halophilus: HBHAL_4762
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Entry
HBHAL_4762 CDS
T02031
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hhd
Halobacillus halophilus
Pathway
hhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBHAL_4762 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhd03019
]
HBHAL_4762 (recQ)
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_4762 (recQ)
Enzymes [BR:
hhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HBHAL_4762 (recQ)
Messenger RNA biogenesis [BR:
hhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HBHAL_4762 (recQ)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HBHAL_4762 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
Helicase_Sgs1
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CCG47100
UniProt:
I0JSH8
LinkDB
All DBs
Position
3698860..3701001
Genome browser
AA seq
713 aa
AA seq
DB search
MMQQAEEILQKYYGYSSFRKGQKEAISHVLHDRNTLAVMPTGGGKSLCYQIPGLSLEGTA
IIISPLISLMKDQVDALNSYGIAATYINSSLTAGEQRQRLHDLRQGRYKFVYVAPERFDS
PQFLSTIQSIPLSLIAFDEAHCISQWGHDFRPSYRSIVPTLYQITNLPVLMALTATATQE
VIRDIKHLIDVPDESIVNTGFARDNLSFRIIKGRDKRDFVEEYLKTRPNESGIIYTATRK
DADSLQHYLSKKGFSAGKYHAGMTENQRKQAQVDFVQDEITTIIATNAFGMGIDKSNVRY
VIHYSMPMNIESYYQEAGRAGRDGEPGDCALLFSSQDINLQRFLIDQSPSEEKKKEEYAK
LQAMINYCHTHTCLQQYILDYFEDPFSSEPCGKCSNCTLVGEVQDMTLEAQMVLSCVKRM
GERFGAGLTAKVLKGSSDQKVKQFKFNTLSTYGIMSSYTEKELTRFIHFLTAEGYLTPGQ
GRYPALQLTDESVAVLKGDQPVEMLVESTTAKHESNYNADYFEELRQIRKSIADEAGLPP
YVIFSDATLKEFTIYLPENKNEMLAIKGVGERKFEQYGETFLETIRPWARETDAKPVPDK
SSSVSIRKKEANDERPSYQVTFEMWKEESKEIGEIAKERGLSSQTIENHLFRSAHEGLEL
NWDRWFNEEQEKNILQKLEEMEERKLKPLKEALPEDYTYSMIKAVLNKHELMK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaggctgaggaaattttacaaaaatactatggctattcttcttttcggaaa
ggacagaaagaagcgatcagtcatgtactccatgaccgtaatacattggctgtcatgcct
acaggtggaggtaaatcgttatgctatcaaattccaggcttaagtcttgagggcacagct
attattatctctccgcttatttccttaatgaaagatcaggttgatgctctgaattcctat
ggaattgccgcaacttatattaatagctctcttacagcaggtgagcaaaggcagcgtctt
cacgatttaagacaagggcgttataagtttgtgtatgttgctcctgaacgatttgattcc
cctcagtttttgtcaacgattcagagtattcccttatctctcattgcctttgatgaagcc
cactgtatttcgcagtgggggcatgatttcagacccagttatcgttccatcgtacccacc
ctgtaccagatcactaatttacctgttttaatggcgctcaccgctacggctacccaagag
gtaattcgggatattaaacatctgattgatgtaccagatgaatcgatcgtcaacacgggg
tttgcgagggataatttatcattccgcattataaaaggccgggataaaagggattttgta
gaagaatatttaaaaacccgccctaatgaatccggcattatctacaccgctactagaaaa
gatgcggacagtttacagcactacttatctaagaaaggcttctcagccgggaaatatcat
gcagggatgacagaaaaccagaggaagcaggctcaagtggattttgtccaggatgaaatc
actacaataattgcaaccaacgctttcggtatggggatcgataaatccaacgtgcgatat
gtgatccattattcaatgcctatgaatatcgaatcctattaccaggaagctggacgtgcg
ggacgggacggtgaacctggtgactgtgctcttttattttccagtcaggatattaatctc
cagcgttttttaattgaccagtccccttcagaagaaaaaaagaaagaggaatatgccaag
cttcaggctatgattaactattgtcatacccatacttgtctgcagcagtatattctcgat
tatttcgaagacccattttcttcagaaccttgtggtaaatgttcgaactgtacactcgta
ggtgaagttcaggacatgacccttgaagcccagatggttttatcctgcgttaaaagaatg
ggagaacgcttcggtgcaggtttaactgctaaagtactgaaagggtcttccgatcagaaa
gtaaaacagttcaagtttaacaccctctccacatatggcattatgtccagctatacggag
aaagaactgacacgctttattcattttctgacggcagaaggatatctcactcctggacaa
ggtcgttatcctgctctacagctgacagatgaatccgtcgctgtccttaaaggggatcaa
ccagtggaaatgctcgtggagtccactactgctaaacacgaaagcaactacaatgcagac
tattttgaagagctgcggcaaatcaggaaatcaattgcagatgaagctggacttccacca
tatgttatattttctgatgcgacacttaaagaattcaccatttatttgcctgaaaataaa
aacgagatgttagctattaagggagtcggagaacgaaagtttgagcaatacggagaaacg
tttttggagaccattcgcccatgggcaagggaaacggatgctaagcccgttcctgacaaa
agctcttctgtctccattagaaaaaaagaagcgaatgatgaacgtccaagttatcaggtt
acatttgagatgtggaaagaagaaagcaaagaaatcggagaaattgcaaaagaacgcggt
ttaagttcgcaaacgatagaaaaccacttgttccgaagtgctcatgaggggctggagctg
aattgggatcgctggtttaacgaagagcaagagaagaacattcttcaaaaacttgaagaa
atggaagaaagaaaattaaagccattgaaagaggctttgcccgaagattatacgtattcc
atgattaaagcggtactgaacaagcatgaacttatgaagtaa
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