Halobacillus halophilus: HBHAL_4933
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Entry
HBHAL_4933 CDS
T02031
Symbol
ykoV
Name
(GenBank) probable DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
hhd
Halobacillus halophilus
Pathway
hhd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HBHAL_4933 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_4933 (ykoV)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HBHAL_4933 (ykoV)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Prok-RING_4
Rad50_zn_hook
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
CCG47270
UniProt:
I0JSZ8
LinkDB
All DBs
Position
complement(3882956..3883792)
Genome browser
AA seq
278 aa
AA seq
DB search
MHTMWKGTISFGLVNIPIKLHAATENKDIKLRQLHEECKSPIEYKKRCPVCEREVESQEI
VKAYEYAKNKFVVLDAEDLETLKKEQEDKAVEILDFVKLEEIDPIYFERSYYMSPSEGGS
KAYGLLRKALTDTGKIGVAKIIIRSKEQLAIVRVYQNTLVMETIHFPDEVRQSKDVPNVP
EETELSKKEVSTAVTLIDQLTAEFDPEKYKDEYRTALLDLIEAKRNNEEVTTAADKPKPD
NVTDLMEALEKSLEKTKGGTKKKTTKRKSNAGSKKKTS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaaaggcacgattagctttgggctggtcaatattccaattaagctt
catgcagcaacagagaataaggacattaagcttaggcagcttcatgaagaatgtaagtcg
ccgattgaatataaaaaaagatgcccggtttgtgaaagagaagtagaaagtcaggaaatt
gtaaaagcatatgaatacgctaagaacaaattcgtggtcttagatgcggaagatctggag
acgttgaaaaaggaacaggaagataaagccgtagagattctggactttgtaaaacttgaa
gaaattgaccccatttattttgaaagaagctactatatgtcaccgagcgaaggtggaagt
aaagcctatggattgttaagaaaagccctaaccgacacaggcaaaattggtgtagcgaag
attattattcgttctaaagagcagcttgccatcgttcgcgtttaccaaaatacgctggtt
atggagaccatccatttcccggacgaagtccgacaatctaaagatgtccctaacgttccg
gaagaaacggaactaagcaaaaaagaggtaagtacagccgtgacgttaattgatcaactt
actgcagagtttgacccggaaaagtataaggatgaatatcgtacagctctgcttgattta
attgaagcgaaaagaaacaatgaagaggttaccacagctgcggataaaccgaagcctgat
aatgtaactgatttgatggaagctttagagaaatctttagaaaaaacaaaaggagggacc
aagaaaaagacaacaaagcgaaaatcgaatgcaggttcaaagaagaaaacctcataa
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