Helicobacter hepaticus: HH_0023
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Entry
HH_0023 CDS
T00133
Symbol
rho
Name
(GenBank) transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
hhe
Helicobacter hepaticus
Pathway
hhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HH_0023 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhe03021
]
HH_0023 (rho)
03019 Messenger RNA biogenesis [BR:
hhe03019
]
HH_0023 (rho)
Transcription machinery [BR:
hhe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HH_0023 (rho)
Messenger RNA biogenesis [BR:
hhe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HH_0023 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
ATPase_2
OB_RNR_1st
Spore_III_AA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AAP76620
UniProt:
Q7VK69
LinkDB
All DBs
Position
24450..25742
Genome browser
AA seq
430 aa
AA seq
DB search
MADNKRTHTPVEGYQLEDLRIKSIKQLINIAEEIGVENPSDYRRQDLIFEILKTQVNQGG
YILFSGILDITNEGYGFLRALTESLADSQNDTYVSQSQIRRFALRNGDIVTGQVRAPKDQ
ERYYALLKIEAINYMSLEENKNRPLFDNLTPLFPQEQLKLEYESSKVTGRMLDLFSPIGK
GQRALIVAPPRTGKTELMKELAHGIAKNHPDVELMVLLVDERPEEVTDMERSVKGQVFSS
TFDMPATNHIRVADLVIESAKRKVEMGKDVVILLDSITRLARAYNAATPSSGKVLSGGVD
ANALHKPKRFFGAARNIEQGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLARSIA
DRRIYPAFDVLKSGTRKDDLLLGKDNLTKVWMLRNVMHTMDDIEALTFIYSKMKQTENNE
EFLNMMNSQE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaataaacgaactcatacacctgtggaaggctatcagcttgaagatttgcgt
attaaaagcattaaacaactcatcaatattgctgaagaaatcggagtagaaaatccaagt
gactatcgccgacaagatttaatttttgagattctcaaaactcaagttaatcagggtgga
tacattcttttttcgggtatattagatatcacaaatgaaggctatggcttcttacgcgca
ttaaccgaaagtcttgcagattctcaaaatgacacttatgtatcacaatctcaaattcgc
cgttttgctttgcgtaatggtgatatagtaacagggcaagtgcgtgcaccaaaagaccaa
gagcgatattatgctctccttaaaattgaagcaattaactatatgtcgcttgaagaaaac
aaaaatcgccctctttttgataaccttacccctctattcccacaagagcagcttaagctt
gaatacgaatctagcaaggttacaggacgtatgcttgatctctttagccctattggtaaa
ggacaacgtgcccttattgttgctcctccacgcacaggaaaaacagagttaatgaaagaa
ttggctcacggcattgcgaaaaatcaccccgatgttgagttaatggtattgcttgtagat
gagcgtccagaagaagttactgatatggaacgaagcgtcaaaggacaagtttttagctct
acttttgatatgccagcaacaaaccacattcgcgtagcagatttagtcattgagagtgct
aaacgaaaagttgaaatgggtaaagatgtagtaattcttcttgattctatcacacgtctt
gctcgagcatataatgctgctactccctcaagtggtaaagtgctaagtggtggtgttgat
gcaaatgctttgcataaacctaaacgattttttggtgcagcacgtaacattgaacaaggt
ggcagccttactattatcgcgactgcacttattgaaacaggctcaagaatggacgaggtc
atctttgaggaatttaagggcacaggtaatagtgaaattgtccttgcacgttctatagct
gaccgcagaatctaccctgcttttgatgtgcttaaaagtgggacacgtaaagatgatttg
cttcttggcaaagataatctcacaaaagtatggatgctacgcaatgtaatgcacacaatg
gacgatattgaagcactcactttcatttactcaaaaatgaaacaaacagagaataatgaa
gagtttttaaatatgatgaatagtcaagaataa
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