Helicobacter hepaticus: HH_0124
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Entry
HH_0124 CDS
T00133
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hhe
Helicobacter hepaticus
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhe03016
]
HH_0124 (truB)
Enzymes [BR:
hhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HH_0124 (truB)
Transfer RNA biogenesis [BR:
hhe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH_0124 (truB)
Prokaryotic type
HH_0124 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AAP76721
UniProt:
Q7U330
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All DBs
Position
complement(119546..120400)
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AA seq
284 aa
AA seq
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MANALLVAAYKPPFLSSNACLSRLKKHFGMSKAGYLGTLDPFAKGVLVVGFGSYTRLFPH
LQKVPKAYRATLWLGAKSASLDIEHIESIEIIPEYNQSDIEKILFSLKGTFDYTPPAFSA
KHINGQRAYKLAREGKVFTLQQIQMSIYNITLLSYHHPFVHFEVSVSEGAYVRSIGEIIA
KKLGVNGVLSSLERISEGQMSVSATEQIRILNPLEYLPYPQLENMHRFSKQMYDGKKITL
KNAQKGKYIVCFEDFFSIIEIFSNGGIQYILNRIEYVDTFKKTR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatgctctactcgtggctgcgtataagccaccatttttaagctcaaatgcgtgt
ctctctcgtttaaaaaagcactttggtatgtcaaaggcgggttatcttggcacacttgac
ccttttgcaaaaggtgtgcttgtagtgggatttggtagctatacgcgtctttttccgcat
ttacaaaaagtgcctaaagcttatagagcgacactttggcttggtgcaaagtctgcaagt
ttggatattgagcatatagaatctattgagattatccctgaatacaatcagagtgatata
gagaagattctcttttctttaaaaggcacttttgattatacgcctcctgcttttagcgca
aaacatatcaatggacaaagggcatataaacttgcaagagagggtaaggtatttactcta
cagcagattcaaatgagtatttataatattacattgttatcatatcatcacccttttgtg
cattttgaagtgagtgtgagtgagggtgcatatgtgcgaagtattggggagataatagcc
aaaaagcttggcgtaaatggtgtgctctcaagcctagagcgaataagtgagggacaaatg
agcgtgagtgccacagagcaaataagaatccttaatccacttgagtatctcccttatcct
caactagaaaatatgcacagattctctaagcagatgtatgatggtaaaaaaattacatta
aaaaatgcccaaaaaggaaaatatatagtttgttttgaggattttttttctataattgag
atattttcaaatggtggcatacaatacattttaaataggatagaatatgttgatactttc
aagaaaacaagatga
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