KEGG   Helicobacter hepaticus: HH_0587
Entry
HH_0587           CDS       T00133                                 
Name
(GenBank) conserved hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hhe  Helicobacter hepaticus
Pathway
hhe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HH_0587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhe03019]
    HH_0587
Messenger RNA biogenesis [BR:hhe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HH_0587
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 HDOD KH_2 KH_KhpA-B DUF2981 dUTPase KH-I_KHDC4-BBP DUF5339
Other DBs
NCBI-ProteinID: AAP77184
UniProt: Q7VIL7
LinkDB
Position
complement(564791..566167)
AA seq 458 aa
MRLKQEYEQECATLHKNYESRLAKLDKEESNRYQQLNNQKQEVEKEKQEIAELKVRLLRS
QGEQDKLKQEYQHIKKEMLDVLSKYAQMTREEATNILLSHLEEELIEEKAFLIRRYEKQA
YDEAKKQANFVLAQATTRYAGDFATERLVNVINLPNDELKGRIIGKEGRNIKTLETISGV
DVIVDDTPGSIILSSFNLYRRAIATKTIEKLVEDGRIQPSRIEEVYERVKDEMDEQMRQD
GENIVLDMELGYMHPELKFLLGKMRYRASFGQNALGHSIEVANLAAIIAGELGGDEKLAR
RAGILHDIGKALTQELGGSHVDLGVEVCTCYKEHPVVINAIKAHHGYEEIQSIECAAVCA
ADTLSAARPGARREALENFLKRMQDIERIAMDKIGVKQAYAINAGREVRVIARADLVSDG
QSVILAREIAKEIESTLQYPGEIKVSVIRETRAVEFAR
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgcgcttaaagcaagaatatgagcaagagtgtgcaacattgcacaaaaattatgaatct
cgtcttgctaaacttgataaagaagaaagtaatcgttatcagcagcttaataatcaaaaa
caagaagtagaaaaagaaaagcaagagattgccgagcttaaagtgcgtcttttgcgttct
caaggagagcaagacaagctcaagcaagaatatcaacatatcaaaaaagagatgcttgat
gttctttcaaaatatgctcaaatgacaagagaggaagccacaaatattttgctttctcat
cttgaagaggagcttattgaagagaaagcatttcttattcggcgttatgaaaagcaagcg
tatgatgaagccaaaaaacaagcaaatttcgttctagctcaagctactacgcgttatgca
ggggattttgctactgagcgattggtaaatgtaattaatctacctaatgatgaactcaaa
ggtcgtattattggcaaagaggggcgtaatattaagactttagagacaattagtggtgtt
gatgtcattgttgatgatacgcccggtagcattattttaagcagttttaatctctatcgc
cgtgctattgcgacaaagacaatagagaaacttgttgaagatggtcgcattcagccctca
cgcattgaagaagtctatgagcgcgtaaaagatgagatggacgagcaaatgcgccaagat
ggtgaaaatatcgtgcttgatatggaacttggttatatgcacccagagttgaaatttttg
cttggtaaaatgcgctatcgtgcatcatttgggcaaaatgcacttgggcattccattgag
gtggctaatctcgcagcgattattgcaggagagcttggaggtgatgaaaaacttgcgcgt
agagcaggaattttgcacgatattggtaaagctctcacacaagagttaggaggtagtcac
gtagatttgggtgtggaagtttgcacttgctataaggaacaccccgtggttattaatgca
atcaaagctcatcacggctatgaggagattcaaagcattgaatgtgcagcagtgtgtgca
gcagataccctctcagctgctcgtccgggtgccaggagagaagcgttagagaatttctta
aaacgtatgcaagatattgaacgcatagctatggataaaattggtgtaaaacaagcgtat
gcaattaatgctggacgcgaagttcgtgtgattgctcgtgcagatttagtaagcgatggg
caaagcgttattcttgcgcgagaaattgccaaagagatagaatctactttgcaatatccc
ggagaaattaaagtgagtgtcatacgagaaacaagagcggttgaatttgcacgatag

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