Helicobacter hepaticus: HH_0587
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Entry
HH_0587 CDS
T00133
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hhe
Helicobacter hepaticus
Pathway
hhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HH_0587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhe03019
]
HH_0587
Messenger RNA biogenesis [BR:
hhe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HH_0587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_2
KH_KhpA-B
DUF2981
dUTPase
KH-I_KHDC4-BBP
DUF5339
Motif
Other DBs
NCBI-ProteinID:
AAP77184
UniProt:
Q7VIL7
LinkDB
All DBs
Position
complement(564791..566167)
Genome browser
AA seq
458 aa
AA seq
DB search
MRLKQEYEQECATLHKNYESRLAKLDKEESNRYQQLNNQKQEVEKEKQEIAELKVRLLRS
QGEQDKLKQEYQHIKKEMLDVLSKYAQMTREEATNILLSHLEEELIEEKAFLIRRYEKQA
YDEAKKQANFVLAQATTRYAGDFATERLVNVINLPNDELKGRIIGKEGRNIKTLETISGV
DVIVDDTPGSIILSSFNLYRRAIATKTIEKLVEDGRIQPSRIEEVYERVKDEMDEQMRQD
GENIVLDMELGYMHPELKFLLGKMRYRASFGQNALGHSIEVANLAAIIAGELGGDEKLAR
RAGILHDIGKALTQELGGSHVDLGVEVCTCYKEHPVVINAIKAHHGYEEIQSIECAAVCA
ADTLSAARPGARREALENFLKRMQDIERIAMDKIGVKQAYAINAGREVRVIARADLVSDG
QSVILAREIAKEIESTLQYPGEIKVSVIRETRAVEFAR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaaagcaagaatatgagcaagagtgtgcaacattgcacaaaaattatgaatct
cgtcttgctaaacttgataaagaagaaagtaatcgttatcagcagcttaataatcaaaaa
caagaagtagaaaaagaaaagcaagagattgccgagcttaaagtgcgtcttttgcgttct
caaggagagcaagacaagctcaagcaagaatatcaacatatcaaaaaagagatgcttgat
gttctttcaaaatatgctcaaatgacaagagaggaagccacaaatattttgctttctcat
cttgaagaggagcttattgaagagaaagcatttcttattcggcgttatgaaaagcaagcg
tatgatgaagccaaaaaacaagcaaatttcgttctagctcaagctactacgcgttatgca
ggggattttgctactgagcgattggtaaatgtaattaatctacctaatgatgaactcaaa
ggtcgtattattggcaaagaggggcgtaatattaagactttagagacaattagtggtgtt
gatgtcattgttgatgatacgcccggtagcattattttaagcagttttaatctctatcgc
cgtgctattgcgacaaagacaatagagaaacttgttgaagatggtcgcattcagccctca
cgcattgaagaagtctatgagcgcgtaaaagatgagatggacgagcaaatgcgccaagat
ggtgaaaatatcgtgcttgatatggaacttggttatatgcacccagagttgaaatttttg
cttggtaaaatgcgctatcgtgcatcatttgggcaaaatgcacttgggcattccattgag
gtggctaatctcgcagcgattattgcaggagagcttggaggtgatgaaaaacttgcgcgt
agagcaggaattttgcacgatattggtaaagctctcacacaagagttaggaggtagtcac
gtagatttgggtgtggaagtttgcacttgctataaggaacaccccgtggttattaatgca
atcaaagctcatcacggctatgaggagattcaaagcattgaatgtgcagcagtgtgtgca
gcagataccctctcagctgctcgtccgggtgccaggagagaagcgttagagaatttctta
aaacgtatgcaagatattgaacgcatagctatggataaaattggtgtaaaacaagcgtat
gcaattaatgctggacgcgaagttcgtgtgattgctcgtgcagatttagtaagcgatggg
caaagcgttattcttgcgcgagaaattgccaaagagatagaatctactttgcaatatccc
ggagaaattaaagtgagtgtcatacgagaaacaagagcggttgaatttgcacgatag
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