Helicobacter hepaticus: HH_0601
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Entry
HH_0601 CDS
T00133
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hhe
Helicobacter hepaticus
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhe03016
]
HH_0601 (truA)
Enzymes [BR:
hhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HH_0601 (truA)
Transfer RNA biogenesis [BR:
hhe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH_0601 (truA)
Prokaryotic type
HH_0601 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AAP77198
UniProt:
Q7U328
LinkDB
All DBs
Position
complement(580219..580965)
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AA seq
248 aa
AA seq
DB search
MPTYKAVIAYDGSVFSGFALQKDKRLKSVLGTLKEGFARVGIKSDIIGAGRTDKGVHATG
QVICFQSAHFLDSQVQAIESLRFLLNAKLYPHIMVRSLHIVDDTFHPRFDALWRSYRFLL
SPTQPSPFAAPYVSYEKIGDETLFKNALQAFQGQHNFVFFKKNGSYTKNCIRTIFAIKHY
TYKGLDIVYVRGNGFLRAQVRLMVGAALAYSRAELSFHSLQEQINGQKQHYTYPISPNGL
YLCEVGYR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcccacttataaagcagtgattgcctatgatggtagtgtatttagtggatttgcattg
caaaaagataagcgcttaaaaagtgtgctaggcacacttaaagagggatttgctcgtgta
ggtattaagagtgatattatcggagcaggacgcacagataaaggagtgcacgccacaggg
caggttatatgttttcaaagcgcacattttttagattctcaagttcaagccatagaatct
ttgcgctttttgcttaatgccaagctctatcctcacattatggtgcgttcattgcatatt
gtagatgatacttttcatccacgttttgatgcactttggcgttcttatcgttttttactc
tctcctacacaaccttctccttttgctgcaccttatgtgtcttatgaaaaaattggtgat
gaaacgctttttaaaaatgcacttcaggcatttcaaggacaacataattttgtatttttt
aaaaaaaatggctcgtatacaaagaattgtattcgcacaatttttgcaattaagcattat
acatacaagggtttagatatagtatatgtgcgaggcaatggattcttacgcgcacaagta
agacttatggtaggcgcagcactcgcttatagtcgcgcagaactaagttttcattctcta
caagagcaaataaatgggcaaaaacagcattatacttatcctataagtcctaatggtttg
tatttgtgtgaagtgggttataggtag
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