Helicobacter hepaticus: HH_0793
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Entry
HH_0793 CDS
T00133
Name
(GenBank) Histone-like DNA-binding protein HU (HupB)
KO
K03530
DNA-binding protein HU-beta
Organism
hhe
Helicobacter hepaticus
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhe03032
]
HH_0793
03036 Chromosome and associated proteins [BR:
hhe03036
]
HH_0793
03400 DNA repair and recombination proteins [BR:
hhe03400
]
HH_0793
DNA replication proteins [BR:
hhe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HH_0793
Chromosome and associated proteins [BR:
hhe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HH_0793
DNA repair and recombination proteins [BR:
hhe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HH_0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AAP77390
UniProt:
Q7VI16
LinkDB
All DBs
Position
768908..769195
Genome browser
AA seq
95 aa
AA seq
DB search
MNKAEFVDLVKKVGEYNTKKDAEQAVNSFVDAISKALSKKQSVELVGFGKFETAIQKAKT
GKVPGTNKTYTTKEKSVPKFRPGKGLKDQVAKAKK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggctgagtttgtagatttggttaagaaagttggtgaatacaacacaaaaaaa
gatgctgaacaagcagtaaattcttttgtagatgctatctccaaagctctttctaaaaag
caaagtgtagaacttgtaggttttggtaaatttgaaacagctattcaaaaggctaaaaca
ggtaaagttcccgggacaaacaaaacttacacaacaaaagaaaaatctgtgcctaagttc
cgccctggaaaaggtttgaaagaccaagtagcaaaagctaaaaaataa
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