Helicobacter hepaticus: HH_0931
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Entry
HH_0931 CDS
T00133
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhe
Helicobacter hepaticus
Pathway
hhe03420
Nucleotide excision repair
hhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH_0931 (rep)
03430 Mismatch repair
HH_0931 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhe03400
]
HH_0931 (rep)
Enzymes [BR:
hhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH_0931 (rep)
DNA repair and recombination proteins [BR:
hhe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH_0931 (rep)
MMR (mismatch excision repair)
Other MMR factors
HH_0931 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AAP77528
UniProt:
Q7VHN4
LinkDB
All DBs
Position
complement(903972..906002)
Genome browser
AA seq
676 aa
AA seq
DB search
MPLSQLNAQQAEAATASSGHNLIIASAGTGKTATIVGRIAYLLNQGYAPQDILLLTFTNK
ASSEMLARIGKIFGENLAKNIESGTFHAVAYRFLREHQHIHLKQPKELQMLFKSLYDKRI
FTDNDVNPYSAQYLYESYSLFVNSAFSGGFGAWIIQRNPQQEIYIPIYEDVLAEFAALKR
QHYYADYNDLLLLYKEALKARQSVLFKEVLCDEYQDTNPLQDSILDALNTPSLFCVGDYD
QSIYAFNGADISIISGFREKYKDARVFTLSKNYRSSKHILHLANKVIQNNERIYPKHLEV
VKQGDFAPPKLVWYDELFLQYQGIAKHIASSNCSYEDTAIIFRNNSSADGIEASLRELNI
PSKRKGSISFFDTKEVRLLLDICSLVHNPRDMMAYIHTLSYGKGIGEVIAKDIYEALFTL
GEGNCHKGMFEPNSAIKAYKQRNKNTQLGLFDDFFVLESQARFNEFISPQFASHLILQHP
KLNKESAIFLSDFYDMLHSIYTLHSPKVLILRIMNAKFFQGIMHILAHTRAKNKDGSIDD
TRLENALESIKRKLSLLYDLSKNYDDLSKFLNAMILGSSEATEGSGVHLLSVHAAKGLEF
QNVYVVDLMDGRFPNRKLMSKGGSLEEERRLFYVAITRAKENLVLSFAKKDAIKNIDYTP
SIFLYEGELLHKNSVI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccactttcccaactcaatgcccaacaagcagaggcagctactgcatcaagcggacat
aatcttataattgcttcagctggcacgggcaaaactgctacgattgtagggcgcatagct
tatcttttgaatcaaggttatgcaccacaagatattttattgcttacttttactaataaa
gcaagtagcgaaatgcttgcacgtatagggaaaatttttggtgaaaatttagcaaaaaat
attgaatctggcacttttcacgctgtggcttatcgttttttgcgtgaacatcagcatatt
catctcaaacagcccaaagagcttcaaatgctttttaaaagtctttatgataagagaatc
tttacagataatgatgtcaatccatattctgcacaatatctttatgagagttattcactt
tttgttaattctgcttttagcggtggattcggagcgtggattatacagagaaatccgcaa
caagagatttatatcccaatttatgaagatgttttagcagaatttgcagcgcttaagcgc
caacattattatgcggattataatgatttacttttgctttataaagaggcattaaaagca
aggcagagcgtgctttttaaggaggtgctatgtgatgaatatcaagataccaaccctttg
caagattctattcttgatgcgcttaacactccaagtctcttttgcgtaggggattatgat
caaagtatttatgcttttaatggcgcggatataagcattattagtggttttagagagaaa
tataaagatgcgcgggtttttacgctaagcaaaaattatcgttcaagcaaacatatctta
catcttgcaaataaagttatccaaaataacgagcgcatttatcccaaacatttagaagta
gtaaaacaaggagattttgctccacctaagcttgtatggtatgatgaacttttcttgcaa
tatcaagggattgcaaagcatattgcttcaagcaattgttcttatgaagatacggcaatt
atttttcgcaacaattcaagtgctgatgggattgaggcgagtttaagagagctaaatata
ccttctaaacgcaaaggaagcatcagtttttttgataccaaagaagttcgccttttgctt
gatatttgttctttagtgcataatccgcgcgatatgatggcgtatattcatacattgagc
tatggcaaagggataggcgaagttatagcaaaagatatttatgaggcacttttcacgcta
ggtgaaggtaattgccataaaggtatgtttgagccaaatagcgcaataaaagcgtataaa
caacgtaataaaaatacacaattagggctttttgatgatttttttgtcttagaatcccaa
gcgagattcaatgagtttatctcgccacaatttgcttctcatctgattttgcaacacccc
aagcttaataaagaaagcgcgatatttttaagtgatttttatgatatgcttcattctata
tatacattacatagtccaaaggtgcttattttacgcattatgaatgcaaagttttttcaa
ggaattatgcacattcttgcgcacacacgcgcaaaaaacaaagatggcagtattgatgat
acgcgtttagaaaatgctttagaatctattaagcgcaaactctctcttttgtatgattta
tcaaaaaactatgacgatttaagtaaatttttaaatgcaatgattctaggttcaagcgag
gcaactgaaggaagcggggtgcatttattgagtgtgcacgctgcaaaagggttagaattt
caaaatgtatatgtagtggatttaatggatggacgatttcctaaccgaaaacttatgagc
aaaggtggcagtttggaagaggaacgacggcttttttatgtggcaatcacacgcgcaaaa
gagaatctcgtgctttcttttgcgaaaaaagatgcgataaaaaatatagattatactccc
tctatatttctttatgagggcgaattgctccataaaaatagtgtgatttag
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