Helicobacter hepaticus: HH_1358
Help
Entry
HH_1358 CDS
T00133
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hhe
Helicobacter hepaticus
Pathway
hhe03420
Nucleotide excision repair
hhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH_1358
03430 Mismatch repair
HH_1358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhe03400
]
HH_1358
Enzymes [BR:
hhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH_1358
DNA repair and recombination proteins [BR:
hhe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH_1358
MMR (mismatch excision repair)
Other MMR factors
HH_1358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DEAD
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
AAP77955
UniProt:
Q7VGG3
LinkDB
All DBs
Position
1313613..1315727
Genome browser
AA seq
704 aa
AA seq
DB search
MPVSLSSVQPLVPQTLEQTIVSLNDAQKQAVEHIDGAMLILAGAGSGKTKTITTRLAYLI
DEVGIPPSATLTLTFTNKAAQEMRERALTLLHNRYESPPLLCTFHRFGLLFLRFHITALG
RNANFVVLDTDDKRAILKSLCKIRPISQLDYYISDMKNAFLSPEQAQTYAHSEEYKLMNR
IYGEYENYLLNKNLLDFDDLLYLTYAILLKNDNIAKQMSEKYHYIMVDEYQDTNEIQYKI
LKRLCLAHTNLCVVGDDDQSIYGWRGANVKNILGFPKEFDEVKVVKLEENYRSSEQILNA
ANALISHNSKRLGKNLKSIKGAGANVRVIESENESTEAEFLAKDILTLLSQGINPSEIAV
LFRVNALSRSIEEGFNRAKIPYKIIGAVRFYERAEIKDLLCYLRLIVNPNDDYSFLRIIN
RPRRGIGKITQLKLEELARTFNTSCFSSITQYTQQSKEAIGEKAYNALLELTQNIERWRK
YTDLADVIEDMQEHIVFTFSRLDEVDRKGNIEEFYGMFRDYAIANPSNQVEDFLNDIALA
SPTDELTGEYVSCMSIHMAKGLEFKYVYVIGFEEGIFPLWNDEDEIQEERRLGYVAITRA
KDFLTLCSAKSRLRRGKREWLEQSRFLRESGLLGVYNAPSLYKTQSIQEEAEVVFSKGMK
VQHKLFGVGVVESIKGKGSQCQLRINFSGLERVILASFVQKVCE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccggtatctctctcatctgttcaaccacttgttccacaaacacttgagcaaactatt
gtttcgcttaatgacgctcaaaagcaagcagttgaacatattgatggggcaatgcttatc
cttgcaggagcagggagtggtaagactaaaacaattacaacacgtttagcttatctgatt
gatgaggttgggattcccccaagtgccacacttacacttaccttcactaataaagctgcg
caggagatgagagagagagccttaacacttttgcataatagatatgaatctccaccgctt
ttatgcacttttcatcgttttggactactttttttacgctttcatattactgcacttggg
agaaatgcaaattttgtagtgcttgatactgatgataaacgcgctattttaaaatctttg
tgcaagattcgtcctatttcacagcttgattattatatttcagatatgaaaaatgccttt
ctttcgcccgaacaagcacaaacttatgcccatagtgaagaatataagctaatgaataga
atctatggggaatatgaaaattatttattgaataaaaatttacttgattttgatgatttg
ctttatcttacgtatgcaattttgcttaaaaatgacaatatagcaaagcaaatgagcgaa
aaatatcactacattatggttgatgaataccaagatactaatgagattcaatataaaatc
cttaaacgtttatgtcttgctcatactaatctttgtgttgtaggtgatgatgatcagagt
atttatgggtggcgtggagcaaatgtgaagaatatcttaggatttcctaaggaatttgat
gaagtaaaggttgttaagttagaggaaaattatcgctcaagtgagcagattcttaatgct
gcaaatgcacttatttctcacaatagtaagcgtttgggtaaaaatttaaagagtatcaaa
ggtgctggagcaaatgtaagagtaatagaaagtgaaaatgaaagcacagaagcggaattt
cttgctaaagatattttaacgctcctttctcaaggtataaatccgagcgaaattgcagtt
ttgtttcgtgtaaatgcactctctcggagtattgaagagggctttaatcgtgctaagatt
ccctataaaattattggagcagtgcgcttttatgaacgagcagagattaaagatttactt
tgctatttgcgattaattgttaatcctaatgatgattattcatttttacgcattattaat
cgccctagacgagggattggtaagattacacaacttaaattagaagaacttgcgcgaaca
ttcaatacctcttgtttttcaagtattacccaatatacacagcagagcaaagaagccatt
ggagaaaaggcatataatgcacttttggagcttactcaaaatattgaacgttggcgtaaa
tatacagatttagcagatgtgattgaagatatgcaagagcatattgtatttacattcagt
aggcttgatgaggtagatagaaagggaaatattgaggaattttatggtatgtttcgtgat
tatgctattgctaatccaagcaatcaagttgaagattttttaaatgatattgctttggca
agtcctactgatgaattgacaggagaatatgtgagttgtatgagcatacatatggctaag
ggattagagtttaaatatgtatatgtgattggttttgaagagggtatttttcctctttgg
aatgatgaagatgaaatacaagaagagagacgattaggctatgtggcaatcacaagagcg
aaagattttcttacattatgttcggcaaaaagcagattgcgtaggggtaaaagagaatgg
cttgaacaatcgcgttttttaagagaaagtggattattgggcgtatataatgcaccaagt
ctttataaaactcaatctatacaagaagaagcagaagtggtatttagcaaaggtatgaaa
gtgcaacataaactctttggtgtaggtgtagtagaatctataaagggtaagggaagtcag
tgtcagcttaggattaatttttccggattagagcgcgtgattctagcttcatttgtgcaa
aaggtatgcgaatga
DBGET
integrated database retrieval system
