Helicobacter hepaticus: HH_1548
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Entry
HH_1548 CDS
T00133
Symbol
uvrB
Name
(GenBank) excinuclease ABC
KO
K03702
excinuclease ABC subunit B
Organism
hhe
Helicobacter hepaticus
Pathway
hhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH_1548 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhe03400
]
HH_1548 (uvrB)
DNA repair and recombination proteins [BR:
hhe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH_1548 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HH_1548 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
SWI2_SNF2
Kinesin
Microtub_bd
DUF87
UB2H
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AAP78145
UniProt:
Q7VFX7
LinkDB
All DBs
Position
complement(1483878..1485854)
Genome browser
AA seq
658 aa
AA seq
DB search
MGKFILDSQFAPAGDQPQAIQKITQFIHNGAQYSTLVGVTGSGKTYTMANIIANLNIPTL
IMTHNKTLAAQLYSEFRGFFPKNHVEYFISHFDYYQPEAYIPRRDLFIEKDSSINEDLER
LRLSATTSLLAYDDIIVIASVSANYGLGNPAEYLTMIHKFEIGQEEAQKTLLLKLVDMGY
TRNDTIFERGNFRVNGEVIDIFPAYNEKEFIRIEFFGDEIERIGVFDALERTALTQLESF
VLYAANQFIVGAQRLQSAIKNIEVELENRLEEFVSQDKQIEYQRLKTRTEFDLEMIKESG
ICKGIENYARHLTGKKAGETPYSLLDYFEQKGKPYLLIVDESHVSLPQFGGMYAGDRSRK
EVLVEYGFRLPSALDNRPLRFDEFINKAPHFLFVSATPAQKELELSQEHIAEQIIRPTGL
LDPLYEVRDADNAVLDLYDEIKARIAKNQRVLITTLTKKMAEELSKYYAELGIKVRYMHS
DIDAIERNHLIRALRLGEFDVLIGINLLREGLDLPEVSLIAIMDADKEGFLRSETSLIQT
MGRAARNVEGKVILYAKKITGSMQRAFEVTDYRRTKQEEFNRIHNITPKSVQRNVEQELK
IESSGLSRLYEKASKKIPKSERESIIKELNIKMHQAAKALEFEEAARLRDEIARIRTM
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatttatcttagattctcaatttgcgcccgcaggagaccagccccaagctatc
caaaaaatcacacaatttattcataatggcgcacaatactctactcttgtaggtgttacg
ggcagtggcaaaacttacacaatggcaaatattatcgctaaccttaatatccccacactc
attatgacacataataaaactcttgctgcgcagctttatagcgaatttcgtggatttttt
cctaaaaatcacgtggaatacttcatctcgcattttgattattaccaaccagaagcatat
ataccgcgccgtgatttgtttattgaaaaagattctagtattaatgaagatttggaacga
ttgcgtctatcggctacaacctcacttttagcttatgatgatattattgtcatagcaagt
gtatcggcaaattacggcttaggaaaccctgccgaatatctcacaatgattcacaaattt
gaaatcggacaagaagaagctcaaaaaacacttcttttaaaactcgtagatatgggttat
acacgcaatgacaccatttttgaacgtggaaacttccgcgtaaacggagaagtcattgat
atttttcctgcatacaatgaaaaagagtttattcgcattgagttttttggcgatgaaatt
gaacgcattggcgtatttgatgcattagagcgcaccgctcttacacaattagaatctttt
gtcctctatgcagcaaatcagtttattgtaggggcacaaagacttcagagtgcaattaaa
aatatagaagttgaacttgaaaatcgccttgaagaatttgtttcccaagataaacaaatt
gaatatcaacgacttaaaacccgcacagagtttgatttggaaatgataaaagaatcagga
atttgcaaagggattgaaaattatgcacgccatctcacaggcaaaaaagcaggtgaaacg
ccttattcgctccttgattattttgaacaaaaaggcaaaccttatcttcttatcgttgat
gaatcacacgtaagtttgccacaatttggaggtatgtatgcaggggataggagtcgtaaa
gaagtgcttgtagagtatggtttccgtttgccaagcgcgcttgataatcgtcctttacgc
tttgatgaatttatcaataaagcgcctcattttctctttgtctctgcaactcctgctcaa
aaagaattagaacttagccaagaacatattgccgagcagattatccgccccacaggattg
cttgacccgctctatgaagtgcgagatgctgataatgccgtgcttgatttatatgatgag
ataaaagcaagaattgccaaaaatcaacgagtgctcattaccacacttacaaaaaaaatg
gcagaggagttaagcaaatattatgctgaacttggcattaaggtgcgctatatgcacagc
gatattgacgcgattgaacgtaatcatttaatacgcgctctaaggcttggagaatttgat
gtgcttataggtataaatctcttgcgtgaaggacttgacttacctgaagtgagccttatt
gccattatggacgcagataaagagggattcttgcgctctgaaacaagtctcatacaaaca
atgggtagagctgcacgcaatgtagagggaaaagtaattttgtatgcaaaaaagattaca
ggttcaatgcaaagagcctttgaagttactgattatcgccgcactaagcaagaagaattt
aatcgcattcataacattacgcccaaatctgtgcaaaggaatgtagagcaagagcttaaa
atagaatctagtggcttaagtaggctttatgaaaaagcaagcaaaaaaattccaaaaagt
gagcgcgaaagtatcattaaagagctcaatattaaaatgcaccaagcagctaaagcactt
gagtttgaagaggcggcaagattaagagatgaaattgctagaatccgcactatgtag
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