Herbaspirillum huttiense: E2K99_02375
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Entry
E2K99_02375 CDS
T05937
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hhf
Herbaspirillum huttiense
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_02375
Enzymes [BR:
hhf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E2K99_02375
DNA repair and recombination proteins [BR:
hhf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E2K99_02375
Prokaryotic type
E2K99_02375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBP73928
LinkDB
All DBs
Position
521733..523199
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AA seq
488 aa
AA seq
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MSVGLVWFKRDLRLRDHAALAEAARCERAFAVFIIEPAWLQSFECDPRHVDFLLRSVAPL
QIELKQRGLPLLVRIGEAVQVLESLRREWGVTHLFSHEETGPAWSYARDISVNRWSRIQG
VQWQEFPQTGVVRRLRSRDGWAARWVQRMEAVQIANPVGFRAPQGMQPDKLPTLTALGLP
EARLQPPAGEAAAWDTLRAFLGGGGRDYRRGMSSPLTAPDACSRLSAHLAFGTISMRSVH
QATELAIEHTADRELAYGLRGFSSRLRWHCHFMQKLEDQPDIEWRNVARSLDGLRPGDGG
PWGVEAQARFDAWCEGRTGYPMIDACMRQLCATGWLNFRMRAMLVSFAAYHLWLHWRAPG
LFLARQFLDFEPGIHWSQMQMQSGTTGINTLRIYSPAKQARDHDPLGEYVRRWVPEVGTA
AYPDPIVDEKTALKQAKDALYGQRSSSSARAEADAIQEKHGSCKSGLPSTTQRRTRQKMA
DPGQGVLF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcggcctggtctggttcaagcgcgacctgcgcttgcgcgatcacgcggcgctg
gccgaggcggcgcggtgtgagcgtgcgtttgcggtcttcatcatcgagcctgcatggctg
cagagttttgaatgtgatccgcgtcatgtggatttcctcttgcgctccgtggcccccctg
cagatcgaattgaagcagcgcggcctgccgttgctggtgcgcattggcgaggcggtgcag
gtattggaatctctgcgccgcgagtggggcgtgacccatctcttcagccacgaagaaacc
ggtccggcctggagctatgcgcgcgatatttcggtgaaccgctggagccgcatccagggc
gtgcagtggcaggagtttcctcaaaccggtgtggtgcgccgcctgcgcagccgcgatggc
tgggccgcgcgctgggtgcagcgcatggaggcggtgcagattgccaatcctgtcggcttt
cgtgcgccgcaagggatgcagcccgacaagctgcccacattgaccgcactgggtttgccc
gaggcgcgcctgcaaccgcccgccggcgaggcggcagcgtgggatacgctgcgcgccttc
ctcggtggcggcgggcgcgattaccggcgcggcatgtccagtccgctgaccgcacccgac
gcctgcagccggctcagcgcgcatctggccttcggtaccatttccatgcgcagcgtgcac
caggctaccgagctggccatcgaacacacggctgaccgcgagctggcgtatggcctgcgc
ggcttttccagtcgcctgcgctggcattgccacttcatgcagaagctggaagaccagccc
gatatcgaatggcgcaacgtggcgcgttcgctggatggcttgcgtccgggcgatggcggt
ccgtggggcgtggaggcgcaggcgcgtttcgatgcctggtgcgaaggccgcaccggctat
cccatgatcgatgcctgcatgcgccagctgtgcgccaccggctggctcaacttccgcatg
cgcgccatgctggtcagctttgccgcctatcacctgtggctgcactggcgcgcaccgggg
ctgttcctggcgcggcagttcctggatttcgaaccgggcatccactggagccagatgcag
atgcaatccggcaccaccggcatcaataccctgcgcatctattcgccggccaagcaggcg
cgcgatcatgatccgctgggcgagtacgtgcggcgctgggtgccggaagtcggtacggcg
gcttatcccgaccccatcgtggacgagaagacggcgctcaagcaggccaaggatgccctc
tacggccagcgcagcagcagtagcgcgcgcgcggaagccgatgccatccaggagaagcac
ggctcgtgcaagagcggcctgccctcgaccacccagcgccgcacgcgccagaaaatggcg
gatccggggcagggcgtcttgttctga
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