Herbaspirillum huttiense: E2K99_04175
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Entry
E2K99_04175 CDS
T05937
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hhf
Herbaspirillum huttiense
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_04175
Enzymes [BR:
hhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2K99_04175
DNA repair and recombination proteins [BR:
hhf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E2K99_04175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2797
Motif
Other DBs
NCBI-ProteinID:
QBP74263
LinkDB
All DBs
Position
918629..921388
Genome browser
AA seq
919 aa
AA seq
DB search
MLLATVPIPPTPDFWQQAVRALLREGQPLGQALQAQQEGALDFSGVQLMVPAFSHAQNFK
AALSRELRRPYIAPRINTLSGLLAMQPPGESAPPSESERLMQLYAQLREHGWLKKMFSAR
RNADLLPLAQTLLSLSDELTLALLPEIRANADDEEAAAGRWTQALAQLLEPLAPSAHGML
SDEAALVWQVWKTQLDAHDRIVQRFDAMLALADQASLPLVWVSPTEPEPLDAAFLSAYAQ
RQPVRIVTLDWSRAVIAPLHPLYLSAWEELVRDDDGLPMEADQAAVSPSHPIALPRLCPA
GDLENAAIQSAQIVLRWLQQGKTDIAIVAQDRVTARRLRALLERAEVAVADETGWKLSTT
RAAAALAAWNDLVSARGETNALLDLLKSPFVFPEDADRSDRVMRIEARLRRTNIAGDWQA
LQSAFAEAGQADDLACIITLAKQAARFGGRKTLAQWCETQRGLCQALGMEAALHADGAGE
QCLLMLDEIAAEQGGLSDTFSFAEWRALLNLRLDATSFMPPIKDRRVVMLPLNGARLRRF
EAVLVIGADAAHLPSPPQETLFFSNAVRRELNLATRATRQRQQLRDLIELLCVNPDVVLC
WQTHQDGEPNPVSPWIQRLELKLAQQGAAPLERVTLPPPMKSLRAVLSTMPMPSAPDLLP
ASLSASGFGSFLACPYQFFAQRMLRVAVMDELSDMPEKRDYGSWLHEILYRYHAHLRDND
TPLPARASLLAQLSEEVFQREMQRHPAALAFHARWQKVMPAYLLWANEREAEGWQFAFGE
ESRSHALQWQDGGIELYGRLDRVDRNAEGERAVLDYKTRTAASLRQKVKEEDDHQLAFYG
LLDGGAVEHAHYVALELGPDKKTGDAAAPDFARQQKMLQQQITTTMQAVAHGAALPANGI
ESVCQYCEMRGLCRKGAWL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttgccaccgtaccgatcccgcccactcccgatttctggcaacaggccgtgcgc
gcgctgctgcgcgagggtcagccgctggggcaggcgctgcaggcacaacaggaaggggcg
ctggatttctcgggcgtgcaattgatggtgccggcgttttcccacgcccagaatttcaag
gcggcgctgtcgcgcgaactgcgccggccctacatcgccccgcgcatcaatacgctgtcc
ggcctgctggcgatgcagccgccgggcgagagcgcgccgccctccgagagcgagcggctc
atgcagctctatgcgcaattgcgcgaacatggctggctcaagaaaatgttttccgcccgc
cgcaatgccgacctgctgccgctggcgcagacgctgctgtccctgtccgatgagctgacc
ctggcgctgctgcccgagatccgcgccaatgcggatgatgaagaggcagcggcaggccgc
tggacccaggccctggcgcaactgctggagccgctggctccttcggcgcacggcatgctc
tcagacgaagccgcgctggtgtggcaggtgtggaagacgcagctcgatgcccatgaccgc
atcgtgcaacgtttcgacgcgatgctggcactggcggaccaggccagcctgccgctggtg
tgggtcagcccgaccgaaccggaaccgctggacgcggccttcctgtctgcctacgcccag
cgccagccggtgcgcatcgtcacgctggactggagccgcgcggtcatcgcaccgctgcat
ccgctgtatctctcggcctgggaagagctggtgcgcgacgatgatggtctgccgatggaa
gcggaccaggctgcggtctccccgtcgcatcccatcgcgctgccgcgcctgtgtccggcc
ggcgacctcgaaaacgccgccatccaaagcgcgcagatcgtgctgcgctggctgcagcag
ggcaagaccgacatcgccatcgtggcccaggaccgcgtcactgcacgccgcctgcgcgcc
ttgctggaacgcgccgaagtggccgtggccgacgagaccggctggaagctctccaccacc
cgcgccgccgctgcgctggccgcgtggaatgacctggtctcggcccgcggtgaaaccaat
gcgttgctcgacctgctgaagtcgcccttcgtcttccctgaggatgcagaccgcagcgac
cgcgtcatgcgcatcgaagcccgcctgcgccgtaccaacatcgccggcgactggcaggcg
ctgcaatcggccttcgccgaagcggggcaggccgatgacctggcttgcatcatcacgctg
gccaagcaggctgcgcgcttcggcggccgcaagacgctggcgcaatggtgcgagacgcag
cgcggcctgtgccaggcgctgggcatggaagctgcgctgcacgccgatggcgcgggcgag
caatgcctgctgatgctcgacgagatcgccgccgagcagggcgggctgagcgataccttc
agctttgcggaatggcgcgcgctgctcaatttgcgtctggatgccacttccttcatgccg
cccatcaaggaccggcgggtcgtgatgctgcccctgaacggcgcgcgcctgcggcgtttc
gaggcggtgctggtgatcggtgcggatgccgcacacttgccttcaccgccgcaggaaacc
ctgttcttctccaatgccgtacggcgtgaactgaacctggccacgcgcgccacccgccag
cgccagcaactgcgcgacctcatcgaattgctgtgcgtgaatccggacgtggtgctgtgc
tggcagacccatcaggatggtgagcccaatcccgtgagcccgtggatccagcgccttgaa
ctgaagctggcgcagcagggtgccgcgccactggagcgcgtgacgctgccgccgccgatg
aaatcactgcgtgcggtgctctccaccatgccgatgccgagcgcaccggatctcttgcca
gcctcgctgtcggccagcggtttcggcagtttcctggcctgcccgtatcagttctttgcg
caacgcatgctgcgcgtggcggtgatggatgaactctcggacatgcccgagaagcgcgac
tacggcagctggctgcacgaaattctttaccgctatcatgcccatctgcgcgacaacgac
accccgctgccagcccgcgcgtccttgctggcgcagctttccgaggaagtgttccagcgc
gagatgcagcgccatccggccgcgctggccttccatgcgcgctggcagaaggtgatgccg
gcctatctgctgtgggccaacgagcgcgaagccgagggctggcaattcgcgttcggcgaa
gagtcgcggtcacacgccctgcaatggcaggatggcggcatcgaactgtatggtcgcctt
gaccgggtcgaccgcaatgccgagggcgagcgcgccgtgctcgactacaagacccggacc
gccgccagcctcaggcagaaggtcaaggaagaggatgaccaccagttggccttctatggc
ctgctggacggtggcgcagtggaacacgcgcactacgtcgccctcgaactgggccctgac
aagaaaaccggcgacgccgccgcccccgatttcgcacgccaacagaagatgctccagcaa
cagatcactaccaccatgcaagccgtcgcccacggcgcggctttaccggccaacggcatc
gaatccgtctgccagtattgcgagatgcgcggcctgtgccgcaagggagcctggctgtga
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