Herbaspirillum huttiense: E2K99_04590
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Entry
E2K99_04590 CDS
T05937
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K99_04590 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhf03019
]
E2K99_04590 (groL)
03110 Chaperones and folding catalysts [BR:
hhf03110
]
E2K99_04590 (groL)
03029 Mitochondrial biogenesis [BR:
hhf03029
]
E2K99_04590 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhf04147
]
E2K99_04590 (groL)
Enzymes [BR:
hhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E2K99_04590 (groL)
Messenger RNA biogenesis [BR:
hhf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E2K99_04590 (groL)
Chaperones and folding catalysts [BR:
hhf03110
]
Heat shock proteins
HSP60 / Chaperonin
E2K99_04590 (groL)
Mitochondrial biogenesis [BR:
hhf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E2K99_04590 (groL)
Exosome [BR:
hhf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E2K99_04590 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E2K99_04590 (groL)
Exosomal proteins of breast cancer cells
E2K99_04590 (groL)
Exosomal proteins of colorectal cancer cells
E2K99_04590 (groL)
Exosomal proteins of bladder cancer cells
E2K99_04590 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QBP74335
LinkDB
All DBs
Position
complement(1020252..1021901)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKQVIFGDEARAKVVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI
DKAVTAIVGEVKNLAKPTTTSKEIAQVGSISANSDADIGDIIAKAMEKVGKEGVITVEDG
KSLENELDIVEGMQFDRGYLSPYFINNQEKQIVALDNPFILLFDKKISNIRDLLPVLEQV
AKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEVGLTLEKATLAELGQAKRVEIGKENTTIIDGNGEAAGIEARVAMIRTQIGEATSDY
DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RARANVKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNKVLEGSGNFGYNA
SNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAEVTEDKPAGMPGGMGGMG
GMGGMDGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagcaagttattttcggcgatgaagcacgcgccaaggtcgtcaacggcgtc
aacatcctggccaacgcagtcaaggtcaccctgggccccaagggccgcaacgtcgtgctg
gagcgcagcttcggcgccccgaccgtgaccaaggacggcgtttccgtcgccaaggaaatc
gaactgaaggacaagctggaaaacatgggtgcccagctggtcaaggaagtcgcttccaag
acctccgacaacgccggtgacggtaccaccaccgccaccgtgctggctcaagccatcgtg
cgcgaaggcttcaagtacgtcgccgcaggcttcaacccgaccgacctgaagcgcggtatc
gacaaggctgtcaccgccatcgtcggtgaagtgaagaacctggccaagcccaccaccacc
tccaaggaaatcgctcaagtcggctcgatctcggccaactccgacgcggacatcggcgac
atcatcgccaaggccatggaaaaggtcggcaaggaaggcgtcatcaccgtggaagacggc
aagtcgctggaaaacgaactggacatcgtcgaaggtatgcaattcgaccgtggctacctg
tcgccgtacttcatcaacaaccaagagaagcagatcgtcgctctggacaatcccttcatc
ctgctgttcgacaagaagatctccaacatccgtgacctgctgccggtgctggaacaagtc
gccaaggctggccgtccgctgctgatcgtggctgaagacgtcgaaggcgaagccctggct
accctggtggtcaacaacatccgtggcatcctgaagaccgctgccgttaaggctcctggt
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggtggccaagtg
atcgccgaagaagtcggcctgaccctggaaaaggctaccctggctgaactgggccaagcc
aagcgcgttgaaatcggcaaggaaaacaccaccatcatcgacggcaacggcgaagccgct
ggcatcgaagcacgcgtggcaatgatccgcacccagatcggcgaagcgacctccgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgcactgatcaag
gttggcgctgccaccgaagtcgaaatgaaggaaaagaaggcccgcgtcgaagacgccctg
cacgctacccgcgctgctgttgaagaaggcgtcgtgcctggcggtggcgttgccctgctg
cgtgctcgcgccaacgtcaaggacctgaagggtgacaacccggatcaggaagctggcatc
aagatcgtgctgcgcgccatcgaagagccgctgcgccagatcgtcttcaacgccggcgac
gagccgtcggtggtggtgaacaaggtgctggaaggttcgggcaacttcggctacaacgct
tccaacggcacctacggtgacctggtggaactgggcgtgctggatccggccaaggtgacc
cgttcggccctgcaaaacgctgcctccgtggccagcctgatcctgaccaccgacgccctg
gtggccgaagtgaccgaggacaagccggccggcatgcctggcggcatgggtggtatgggc
ggcatgggcggcatggacggcatgatgtaa
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