Herbaspirillum huttiense: E2K99_06330
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Entry
E2K99_06330 CDS
T05937
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E2K99_06330
09124 Replication and repair
03420 Nucleotide excision repair
E2K99_06330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhf03021
]
E2K99_06330
03036 Chromosome and associated proteins [BR:
hhf03036
]
E2K99_06330
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_06330
Enzymes [BR:
hhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
E2K99_06330
Transcription machinery [BR:
hhf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
E2K99_06330
Chromosome and associated proteins [BR:
hhf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
E2K99_06330
DNA repair and recombination proteins [BR:
hhf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
E2K99_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-ProteinID:
QBP74649
LinkDB
All DBs
Position
1408102..1410408
Genome browser
AA seq
768 aa
AA seq
DB search
MNEALSAGAAQEQSAPRYTVSVRALCEFTAKQGDLDLRFTPTPTAQEGIAGHAIVAQRRG
EGYLSEVTLSADHGALHVRGRADGYDPARQLLEEVKTYRGQLSSLPDNHRHLHWAQLRVY
GHLMCEREGLARIHLALVYFDIGSQQETVLEETRSREELATLFAAQCERFMCWAEQELAH
RAARDTALQTLRFPHGDFRPGQRQLAEAVFRAQTGRRSLLAQAPTGIGKTLGTLFPALKA
APAQRLDKILFLAAKTPGRQLALDAAATLKDHGELPLRVLELCARDKACEYPDRLCRGDS
CPLAQGFYDRLPAARAACLSQPLLDREHLRSVALQHQVCPYYLGSEMTRWSDVIVGDYNY
WFDGGAMLYGMAQAHDWRVSVLADEAHNLVSRARSMYSAQLSRAALRAARAVAPPAVAKP
LERLGRAWTAAGKKADLPYQVLEAPPAKFVEALSSSVGAISDFLAQVAVPLDPPLRDFYF
DAMAFVRLAESFGPHSLFDLTREDERNTVLCIRNVVPAPFLGPRFAFAHATTLFSATLAP
WNYFADLLGMPANTAWIDVESPFQASQLQVKVAHQISTTWQRRAASIAPICELMARQYEE
RPGNYLAFFSSFDYLQQARDAFARAHPHIATWQQSRRMSETDRDAFLARFESAGQGIGFA
VLGGSFGEGVDLPGDRLIGAFVATLGLPQFNPVNEQLRERMEQLFGCGYDYTYLYPGMQK
VVQAAGRVIRTETDQGTVWLIDQRFGRPEVQALLPVWWQIADSRALPA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggctctctcggccggcgctgcgcaagagcagtccgcaccgcgctacaccgtc
tcggttcgtgcactgtgcgaattcaccgccaagcagggcgatctcgatctgcgcttcacg
cccacacccaccgcccaggaaggcatcgccggtcacgccatcgtggcgcagcggcgcggg
gagggctacctgagcgaagtgacgctctcggccgatcatggcgcgctgcatgtgcgcgga
cgcgccgatgggtatgaccccgcgcgccagctgctggaagaagtgaagacttatcgcggc
cagctctccagcctgcccgacaatcatcgccacctgcactgggcgcaactgcgggtctat
ggccacctgatgtgcgagcgggaagggctggcgcgcatccatctggcgctggtgtatttc
gacatcggcagccagcaggaaacggtactggaagaaacccgcagccgcgaggaactggcc
acgctctttgcggcgcaatgcgagcgtttcatgtgctgggccgaacaggagctggcgcac
cgcgcggcgcgtgatacggctttgcagacgctgcgctttccgcatggcgatttccgtccc
ggtcagcggcaactggcggaggcggtatttcgcgcgcagacgggccggcgcagcctgctg
gcgcaggcaccgaccggcatcggcaagacgctgggcaccttgttcccggcgctcaaggcc
gccccggcgcagcggctggacaagatcctcttcctcgcggccaagacccccggccggcaa
ctggcgctggatgccgccgccaccttgaaggatcacggcgaactgccgctgcgcgtgctg
gaactgtgcgcacgcgacaaggcctgcgaatatccggaccggctgtgccggggcgattcc
tgtccgctggcgcagggcttctacgaccgcctgcctgccgcccgggcggcctgcctctcg
cagccgctgctggatcgtgagcatctgcgcagcgtggccctgcagcatcaggtctgtccc
tactacctgggcagcgagatgacgcgctggagcgatgtcatcgtcggcgattacaactac
tggttcgatggcggtgccatgctctacggcatggcgcaggcgcatgactggcgcgtgagc
gtgctggccgacgaggcccacaacctggtctcgcgggcgcgcagcatgtacagcgcgcaa
ctgagccgggcagcgctgcgggccgcgcgcgccgtggcgccgccggccgtggccaagccg
ctggaacggctgggccgcgcctggaccgccgccggcaagaaagccgacttgccctatcag
gtgctggaagcgccgccggccaagttcgtcgaggcactcagcagcagcgtgggcgccatc
agcgatttcctggcgcaggtggcggtgccgctggatccgccgctgcgcgatttctacttc
gatgccatggccttcgtgcggctggccgaatccttcggcccgcactcgctgtttgatctc
acccgggaagatgaacgcaataccgtgctgtgcatccgcaacgtggtgcctgcgcctttc
ctggggccgcgcttcgcctttgcgcatgcgaccacgctgttctcggccacactggccccg
tggaattattttgccgatctgctgggcatgccggccaataccgcctggatcgatgtcgag
tctcccttccaggccagccagttgcaggtgaaggtggcgcatcagatctccaccacctgg
cagcgccgcgcagcctccatcgcaccgatctgcgaactgatggcgcgccagtatgaagag
cggccgggcaactatctggcgttcttctccagcttcgactacctgcagcaggcgcgcgat
gccttcgcacgggcgcatccgcatattgccacctggcagcagtcgcgccgcatgtccgag
accgaccgcgatgccttcctcgcacgtttcgaaagcgccggacagggcatcggctttgcc
gtattgggcggctccttcggggaaggcgtggatctgcccggcgatcgactcatcggcgct
ttcgtcgccacgctggggttgccgcaattcaacccggtcaacgagcagttgcgtgaacgc
atggagcaactgttcggttgcggttacgactacacctacctctatcccggcatgcagaaa
gtggtgcaggcggccggccgcgtcatccgcaccgaaaccgaccagggcacggtctggctg
atcgaccagcgcttcggccggcccgaggtgcaggcgctgctgccggtctggtggcagatc
gccgattcccgtgcgctgccagcgtga
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