Herbaspirillum huttiense: E2K99_11220
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Entry
E2K99_11220 CDS
T05937
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2K99_11220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_11220
Enzymes [BR:
hhf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E2K99_11220
DNA repair and recombination proteins [BR:
hhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2K99_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBP75549
UniProt:
A0A4P7A7V0
LinkDB
All DBs
Position
2464075..2465094
Genome browser
AA seq
339 aa
AA seq
DB search
MNEELKQDPGFGSSLALLDALGIGPVWVRRELAVEEVQAAQAEVPAQETAAAVPAAPVDA
PKVIAPEPVVAQSKPPVAAPVVQPSTPAARPAPAAPARPRAPVDEDGGPPSWLDEMDFGT
ALEPMLIPEGDDEEDAPAVDPMIARIKAMDWPQLKQQVAECRRCGLCEGRKNTVFGVGDE
KAKWLFIGEGPGRNEDQQGEPFVGPAGKLLDNMLLSMGVKRGENAYIANIVKCRPTDDNG
RDRPPSPQEVASCLPYLQRQIELIQPTVLVALGKTAAISLLGMDPATPVSRLRGTVHRYQ
DLPLVVTYHPAYLLRTLTDKSKAWADLCLAMSTYAAQAR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaattgaaacaagatccgggcttcggctcctccctggccctgctggatgcg
ctgggcattggcccggtctgggtgcggcgtgagctggcggtggaagaggtgcaggccgcg
caggcggaagtgcctgctcaggaaacggccgcggccgtgcccgctgcccctgtcgatgcg
cccaaggtcatcgcgcctgaacccgtcgtggctcaatccaagccgcccgtcgctgcgccg
gtggtgcaaccgtccacgcctgctgctcgtccggctcccgccgcccccgcccgtccgcgt
gcgccggtcgatgaagacggcggcccgccttcctggctggacgagatggacttcggtact
gcgctggaacccatgctgatccctgagggcgacgacgaggaagacgccccggccgttgac
cccatgattgcccgcatcaaggccatggactggccccagctcaagcagcaggttgctgag
tgccgccgctgcgggctgtgcgaaggccgcaagaataccgtcttcggcgtaggcgatgaa
aaggccaagtggctcttcatcggcgaaggcccggggcgcaacgaggatcagcagggcgaa
cccttcgtcggccctgccggcaagctgctggacaacatgctgctgtccatgggcgtcaag
cgcggtgagaatgcctacatcgccaacatcgtcaaatgccgtcccaccgacgacaacggc
cgcgaccgtccgccctcgccgcaggaagtggcctcctgcctgccttatctgcagcgccag
atcgaactgatccagccgaccgtgctggtagcactgggcaagacggcagccatttcgctg
ctgggcatggatccggccacgccggtttcgcgtctgcgcggcacggtgcatcgctatcag
gacctgccgctggtggtgacctaccacccggcctatctgctgcgcacgctcaccgacaag
agcaaggcctgggccgacctgtgcctggccatgagcacttacgctgcgcaagcccgctga
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