Herbaspirillum huttiense: E2K99_13840
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Entry
E2K99_13840 CDS
T05937
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03030
DNA replication
hhf03430
Mismatch repair
hhf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2K99_13840
03430 Mismatch repair
E2K99_13840
03440 Homologous recombination
E2K99_13840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhf03032
]
E2K99_13840
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_13840
Enzymes [BR:
hhf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2K99_13840
DNA replication proteins [BR:
hhf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2K99_13840
DNA repair and recombination proteins [BR:
hhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2K99_13840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
TsaE
RNA_helicase
Mg_chelatase
nSTAND6
DNApol3-delta_C
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QBP76020
LinkDB
All DBs
Position
complement(3071062..3072099)
Genome browser
AA seq
345 aa
AA seq
DB search
MSVTSSDGLLPWQGESWRQLQQLRERLPHALLFYGAAGTGKTQFVEAFAKSLLCESPTPE
AHACGVCASCNWFSQSNHPDYRRVRPEVLDDETAEDEAGEEKKTAKASKAPSKDIKIDQI
RALADFMNVSTHRSGLRVVMLYPAEALNTAAANALLKTLEEPPPGTMFLLLSNRLDRLLP
TILSRCRKFALTAPGHDEALAWLKQQGVKDADAWLAEQGGAPLAALEAAQGEGRDALDEL
LRHLAQPGVDGALRAADKLQKTPAADLVGWVQRWLYDLLSLKSAGVVRYYPRYGKELGRL
AERVDALAVSKALRGMGDRRAIADHPLSAKLFIEEMLIDYARLFD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgacttcttccgacggtttgctgccctggcagggcgagagctggcgtcagttg
cagcaactgcgtgagcgcctgccgcatgcgctgctgttctatggcgcggccggtactggc
aaaacgcagtttgtcgaagccttcgccaagtccctgctgtgcgaatcgcccacgccagag
gctcatgcctgcggcgtatgtgcctcctgcaactggttctcgcaatcgaatcatcctgac
taccggcgcgtgcgccctgaagtactggacgatgagaccgccgaagacgaggcaggtgaa
gaaaagaaaacagccaaggccagcaaggccccctccaaggacatcaagatcgaccagatc
cgtgcgctggccgatttcatgaacgtttccacccaccgctcgggcttgcgggtggtgatg
ctgtatccggccgaagcgctcaacaccgccgccgccaatgccttgctcaagacgctggaa
gagccgccgccgggcaccatgttcctgctgctgtccaatcgcctggaccgcctgctgccg
accattctgtcgcgctgccgcaagttcgccctgaccgcgcccggccatgacgaagcgctg
gcctggctcaagcagcagggcgtcaaggatgccgatgcctggctggccgagcagggcggg
gcaccgctggccgcgctggaagccgcccagggcgagggccgtgatgccctggatgaattg
ctgcgccacctggcccagcccggcgtggacggcgccttgcgcgctgccgacaagctgcag
aaaacgccggccgccgacctggtcggctgggtacagcgctggctgtatgatttgctgtcg
ctgaagtcggccggggtggtgcgctactacccgcggtatggcaaggaactggggcgtctg
gccgagcgggtcgatgcgctggccgtgtccaaggccctgcgcggcatgggcgatcgccgc
gccattgcggatcaccccttgtcggccaagctgttcattgaggaaatgctgatcgattac
gcgcgcttgttcgattga
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