Herbaspirillum huttiense: E2K99_15390
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Entry
E2K99_15390 CDS
T05937
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hhf
Herbaspirillum huttiense
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhf03009
]
E2K99_15390 (rimO)
Enzymes [BR:
hhf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E2K99_15390 (rimO)
Ribosome biogenesis [BR:
hhf03009
]
Prokaryotic type
ribosomal protein modification factors
E2K99_15390 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
FAM161A_B
Methyltransf_2
DUF2249
Motif
Other DBs
NCBI-ProteinID:
QBP76312
LinkDB
All DBs
Position
complement(3430903..3432279)
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AA seq
458 aa
AA seq
DB search
MSNPFSPATPALPKVGFVSLGCPKALVDSEQILTQLRAEGYDTAKSYDGADLVIVNTCGF
IDAAVQESLDAIGEALNENGKVIVTGCLGAKKDADGDDIIQKIHPKVLEVTGPHAVGEVM
QAVHKHLPKPHAPFIDLVPPQGVKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVSRPI
ADVMLEAENLFKAGVKELLVISQDTSAYGVDVKFRTGFWNGKPIKTHMTQLVGALGELAQ
QYGAWVRLHYVYPYPHVDQIIPLMAEGKILPYLDVPLQHAHPDVLKRMKRPANGEKNIER
IQAWRALCPDISIRSTFIAGFPGETEAEFEYLLDFLKEAEIDRLGCFAYSPVEGATANEI
ANPVPEEVREERRGRVMQLQEEISKKRLQAKVGKTLRVLIDEVDRNGGTGRTYSDAPEID
GVVYVKPPFEPHRKLEVGQFVDVRITAADAHDLWGAAE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccgttttctcccgccaccccggccctgcccaaggtcggcttcgtctccctc
ggctgccccaaggcactggtcgattccgaacagatcctgacccagctgcgtgccgaaggc
tacgataccgccaagtcctatgacggtgccgacctggtgatcgtcaatacctgcggcttc
atcgatgccgccgtgcaggaatcgctggacgccatcggcgaagccctgaacgaaaacggc
aaggtcatcgtcactggctgcctgggtgccaagaaggatgccgacggcgacgacatcatc
cagaagatccaccccaaggtcctcgaagtgaccggcccgcatgccgtgggcgaggtcatg
caggcggtgcacaagcacctgcccaagccgcatgcgccgttcatcgacctggtgccgccg
cagggcgtcaagctgacccccaagcattttgcctatctgaagatttcggaaggctgcaac
catcgctgcagcttctgcatcatcccctccatgcgcggtgacctggtctcgcgtcccatc
gccgatgtcatgctggaagccgagaacctcttcaaggccggtgtgaaggaattgctggtg
atttcccaggacaccagcgcctatggcgtggatgtgaagttccgtaccggtttctggaac
ggcaagccgatcaagacccacatgacccaactggtcggtgccctgggcgaactggcccag
cagtacggcgcctgggtgcgcctgcactatgtatatccgtacccgcacgtggaccagatc
atcccgctgatggccgaaggcaagatcctgccctacctggacgtgccgctgcagcatgcc
cacccggacgtgctcaagcgcatgaagcgccccgccaatggcgagaagaacatcgagcgc
atccaggcatggcgtgccctgtgcccggacatctcgatccgctccaccttcatcgccggc
ttccccggcgagaccgaggccgagttcgagtacctgctggacttcctgaaggaagccgag
atcgaccgcctgggctgcttcgcctattccccggtggaaggcgcgaccgccaacgagatc
gccaacccggtgccggaagaagtgcgcgaagaacgccgtggccgcgtcatgcagctgcag
gaagagatttccaagaagcgcctgcaagccaaggtcggcaagaccctgcgcgtgctcatc
gatgaagtggaccgcaatggcggtaccggccgcacctattcggacgcgcccgagatcgat
ggcgtggtctatgtgaaaccgcctttcgagccgcaccgcaagctggaagtgggccagttc
gtcgacgtgcgcatcaccgccgctgacgcccatgacctgtggggcgcggccgagtga
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