Herbaspirillum huttiense: E2K99_16040
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Entry
E2K99_16040 CDS
T05937
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2K99_16040 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_16040 (xth)
Enzymes [BR:
hhf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
E2K99_16040 (xth)
DNA repair and recombination proteins [BR:
hhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E2K99_16040 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF8358
Motif
Other DBs
NCBI-ProteinID:
QBP76424
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All DBs
Position
3569354..3570121
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AA seq
255 aa
AA seq
DB search
MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK
TYNGVAILSRHPMNDVVKNNPLFPDEQQRIIAATIEGVRYVCAYIPNGQSLESEKYPYKL
SWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQA
LGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKW
EQPSDHAPVIATLAD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgccacctggaacgtcaactccctcaaggtccgcctgccgcaagtgctgaaa
tggctggaagaaaacccggtcgacgtgctctgcctgcaggaaaccaaactgaccgacgac
aagttccctgccgccgagatcgccgccgccggctatctggtcgagttctcgggccagaaa
acctacaacggcgtggccatcctctcgcgccatccgatgaacgacgtggtcaagaacaac
ccgctcttccccgacgaacagcagcgcatcatcgccgccaccatcgaaggcgtgcgctat
gtctgtgcctacattcccaacggccagtcgctggaatccgaaaagtatccctacaagctc
agctggctggccgccctgcacgaatggctggcccaggaaaaggcgaagaacccgcgcctg
gccctgctgggcgactacaacatcgcccccgaagaccgcgacgtgcacgacccggtggcc
tggcaagggcaggtgctggtctccgaaccggaacgtgaagccttccgcaagctgcaggcc
ctgggcctgacggattcctatcgcctcttcgaacaaccggaaaagatgtacagctggtgg
gactaccgccagatgggcttccgcctcaaccgcggcctgcgcatcgaccacatcctgctg
tccgaagaactggtgccgcgctgcaccgcctgcgtgatcgacaaggtcccgcgcaagtgg
gaacaaccctcggatcacgcaccggtgatcgccaccctcgcagactga
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