Herbaspirillum huttiense: E2K99_16250
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Entry
E2K99_16250 CDS
T05937
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2K99_16250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_16250
Enzymes [BR:
hhf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E2K99_16250
DNA repair and recombination proteins [BR:
hhf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2K99_16250
Prokaryotic type
E2K99_16250
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QBP76462
LinkDB
All DBs
Position
3616227..3617024
Genome browser
AA seq
265 aa
AA seq
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MSSVSTLPAPLSDLIQTAHPSWRAALRAGLEAIQQADPAYLSILAQDDYLPTEGRLFAAF
TQPMDQVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLL
VAEGALHAGQTSGDALAGIAAQAQADVKGSIQTLADLQDNLTAQGFLLLNASLVFRSHVA
PVKDAKGWKPFFETVLRALAEHGQAQGKNLPTLVLWGKIAEQLSGLPLVAQFPRAVAEHP
YNLSFIEHSGMQQLFAPMQLLKKRA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtttccaccctccctgcccccctgtcggacctgatccaaaccgcccatccc
tcctggcgtgccgccctgcgcgccgggctggaggcgatccagcaagccgatcccgcttat
ctttccattctggcgcaggacgattacctgcccaccgaaggccggctgttcgcggccttc
acgcagcccatggaccaggtgcgctacgtgctggtgggcgaaggcccctacccgcgcgcg
gccagcgccaccggcgtgtgcttcatggatggtgcggtgggttcgctgtggtcggaaaag
ggcttgtccaagcaggtcaaccgggcgacctcgctgcgcaatttcatgaagatgctgctg
gtggccgaaggcgcgctgcatgcgggccagaccagtggcgatgcgctggccggcattgcg
gcgcaggcccaggccgatgtgaaaggcagcatccagaccctggccgacctgcaggacaac
ctcactgcgcaaggcttcctgctgctcaatgccagcctggtgttccgcagccacgtcgca
ccggtgaaggacgccaagggatggaagcccttctttgaaacggtattgcgcgcgctggcc
gagcatggccaggcacagggaaaaaacctgcccacgctggtgttgtgggggaagatcgcc
gagcagctgagcggcctgccgctggtagcgcaattcccgcgcgcggtggccgagcatccc
tacaacctcagcttcatcgagcacagcggcatgcagcaattgtttgcgcccatgcagctg
ctgaagaagcgggcctga
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