Herbaspirillum huttiense: E2K99_18285
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Entry
E2K99_18285 CDS
T05937
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hhf
Herbaspirillum huttiense
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhf03016
]
E2K99_18285 (truB)
Enzymes [BR:
hhf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E2K99_18285 (truB)
Transfer RNA biogenesis [BR:
hhf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E2K99_18285 (truB)
Prokaryotic type
E2K99_18285 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QBP76826
LinkDB
All DBs
Position
complement(4089815..4090819)
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AA seq
334 aa
AA seq
DB search
MADDTMADIGSAFPEPQQPRAKRGQQARTPRPPRVPVHGVLLLDKPVGLSSNDALIRAKR
MLNAPKAGHTGTLDPFATGLLPLCFGEATKFSQDLLEADKTYEALVHLGVRTDTGDTEGQ
VLSERAVEVSLSQIEAALAQFRGPISQVPPMHSALKRDGKPLYEYARAGITLEREARNVT
IHALELLDYQAPMLRIRVTCSKGTYIRVLGEDIGEVLGCGAHLNALRRTGVGALTLDGAV
TLETFDAAAELEARKALLLPVDGLLRSFPAVQLSDELARRFLHGQRLPLGKEGVAVPEQT
GRVRVYRSSDAALLGTGLLQEYAILAPERLVSTA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatacgatggcggacattggttccgctttccctgaaccgcagcagccgcgc
gccaagcgcggccagcaggcccgcacgccgcgccccccgcgcgtgccggtgcatggcgtg
ctgttgctggacaagccggtcggcttgtcctccaacgacgccctgatccgcgccaagcgc
atgctcaatgcgcccaaggcgggacacaccggcaccctggatccgttcgccaccgggctg
ttgccgctgtgcttcggcgaagccaccaagttctcgcaggacttgctggaagccgacaag
acttacgaggccctggtccacctgggtgtgcgcaccgataccggcgacaccgaaggccag
gtcctcagcgagcgcgccgttgaggtcagcttgtcgcagatcgaagcggcgctggcgcag
ttccgtggccccatcagccaggtgccgcccatgcactccgccttgaagcgcgacggcaag
cccttgtacgaatatgcgcgcgccggcatcacgctggagcgcgaagcccgtaacgtcacc
atccacgccctggaactgctggactatcaagcccccatgctgcgcatccgcgtcacttgc
agcaaagggacatatatccgcgtgctgggtgaagatattggcgaagtactgggctgtggg
gcgcacctcaatgccctgagacgcactggagtcggcgctctcacgctcgatggcgcagtc
acgctggagaccttcgacgccgccgctgagctggaggcccgcaaggccttgctgctgccg
gtggacggcctcttgcgcagcttcccggcggtgcagctcagcgatgaactggcgcgccgc
ttcctgcacggccagcgcttgccgctgggcaaggaaggcgtggcggtgccggagcagacc
ggccgcgtgcgcgtctatcgcagttcggacgccgccttgctgggcaccggactgttgcag
gaatacgccatcctggcccccgaaaggctggtgtccaccgcctga
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