Herbaspirillum huttiense: E2K99_20105
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Entry
E2K99_20105 CDS
T05937
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hhf
Herbaspirillum huttiense
Pathway
hhf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2K99_20105 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhf03400
]
E2K99_20105 (mutM)
Enzymes [BR:
hhf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E2K99_20105 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E2K99_20105 (mutM)
DNA repair and recombination proteins [BR:
hhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2K99_20105 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
PSMbeta
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QBP77145
LinkDB
All DBs
Position
complement(4499753..4500574)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVEVTRRGVAPHLEGRTVSGVVLRHTGLRWPFPEGLHTMLAGRVIRSTGRRGKYL
LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLS
DGDIEEHLLLRSLGLEPLEDKFSARELFNQTRGRSAPIKQVLLAGDIVVGVGNIYASESL
FKARINPKTPAYKISLARYERLAEAIRETLAAAIEQGGSTLRDFIAVNGQSGYFQQNYFV
YNRTGEPCRICAAPIRQIKQGQRSTFYCVSCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtcgaagtcacccgccgcggggtcgcgccccatttggaaggg
cgcaccgtcagcggcgtcgtactgcgccacaccggcctgcgctggcctttccccgagggc
ttgcacaccatgctggccgggcgcgtgatccgcagcaccgggcggcgcggcaaatatctg
ctgatccatttcgaccatggcacgctcatcgtgcacctgggcatgtccggccacctgcgc
atcctgccgccgggcatcgcgccgcagaagcacgaccacttcgacctcgaagtcggcggc
caggtcatgcgcatgaccgacccgcgccgcttcggtgccatcctgtggcatgacctcagc
gacggcgacatcgaagagcacctgctgctgcgcagcctggggctggagccgctggaagac
aagttcagcgcgcgcgagctgttcaaccagacgcgcggccgcagcgcgcccatcaagcag
gtgctgctggcgggcgacatcgtggtcggggtcggcaacatctatgcgtcggaaagcctg
ttcaaggcccgcatcaatcccaagaccccggcgtacaagatcagtctggcgcgctatgag
cgcctggccgaagccatccgcgagacgctggccgccgccatcgagcagggcggcagcacg
ctgcgcgacttcattgcagtcaacggtcagtcgggttacttccagcagaattatttcgtc
tacaaccgtaccggcgagccctgccgcatctgcgcggcaccgatccgccagatcaagcag
ggccagcgctccaccttctactgcgtgagctgccagaaatga
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