Halomicronema hongdechloris: XM38_003290
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Entry
XM38_003290 CDS
T04928
Name
(GenBank) Penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg00550
Peptidoglycan biosynthesis
hhg01100
Metabolic pathways
hhg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XM38_003290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XM38_003290
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhg01011
]
XM38_003290
Enzymes [BR:
hhg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XM38_003290
Peptidoglycan biosynthesis and degradation proteins [BR:
hhg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
XM38_003290
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ASC69402
UniProt:
A0A1Z3HGH7
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All DBs
Position
355578..357359
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AA seq
593 aa
AA seq
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MALIPFSAPVSTRDTTRTVGRDYQAVVLMAILSLLLLGGFGSRLAYLQLMQGDANRQLAE
NNRIRLLPKRPARGSLLDREGRLLAGNRLSHSVTLWPIALPKSQWPEVIRRLSTLLNIPT
EDIQTKLEQAGYSSLEAVSIARGISPAQATALAEYSAELPAVRLEAEAVRSYPNGDLAAH
VLGYTGELTQEELQERQDAGYRLGDVVGRMGAEAAFEADLRGEWGGQQVEIDSSGRVLRV
LGDKPAISGEDVQLTLDIEIQKVAEAALGDQVGAIVALDPNNGAVLAMVSRPAFDPNIFS
TQITQAQWQQLQSASYPFLNRALRAYPPASTFKIVTTSAALESGRYSPGTVLPTYPYVQV
GGIQFWDWNKAGFGPLGFTGAMAMSSDTFFYQIAMGIKRAPLIEWTRRYGFGQKTGIEIG
ADESAGLVPDNAWKIENVGHEWTIGDTINMSIGQGFLQATPLQVAGMFAIAANGGYRVTP
HLLHDQEDTEDWREPIGLSPTTIDILQKGLRRVITSGTARALNDANLPPIAGKTGTAEAP
PGKSHAWFGGYIPAADPEILVVAFAEHSGGGGSAVTAPMVKQVLAAYVNGQSQ
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctctgataccgttttctgctccggtctctacccgcgacacgacacgtacggtgggt
cgcgactatcaagccgtggtgctaatggccatcttgtcgttgttgttgctgggaggcttt
ggcagccgcctggcctacctgcagctgatgcaaggagacgcgaatcgccaattggcggag
aataaccggattcggttgttgccaaagcggccagcccgggggagtctgcttgaccgcgag
gggcgactgctagcgggcaatcgcctgtctcactcggtgaccctatggccgattgcgcta
ccgaagtcccagtggcccgaagttatccgtcgtctctcgaccttgctcaatattccgact
gaggacattcagaccaaactggagcaagccggctattcctccctagaagcagtctccatc
gcccggggcatcagcccggcccaggccacggctctggccgaatacagtgctgagctacca
gctgtacggctggaggcggaagcggtacgcagctatcccaatggcgacctggcggcccat
gtgctgggctataccggcgaactcacccaggaagagctgcaagagcgccaggatgctggc
tatcgcctcggggatgtagtgggtcgcatgggagctgaggctgccttcgaggccgacctg
cggggggaatggggtggtcaacaagtcgaaattgatagctctggccgagtgctgcgggtg
ctgggcgataagcccgccatctccggggaggatgtgcagctgaccctagatatagagatt
caaaaggtggcggaggcggccttgggcgatcaagttggggccatcgttgccctcgaccct
aacaatggagccgtgctggccatggtcagccgtcccgccttcgatcctaatattttctcc
acccagattactcaggcccagtggcaacagttgcagagtgccagttaccccttcctgaat
cgggctttgcgggcctatccaccagctagcacctttaagatcgtgacgacttcagcagcc
ttggagtcggggcgctatagtcctggtaccgtgctgcccacctatccctatgtgcaggtg
ggcggaattcagttctgggactggaataaggcaggcttcggaccgctgggctttaccggg
gccatggccatgagtagtgatacgttcttctatcaaattgccatgggcatcaagcgagcc
cccttgattgaatggacgcgccgttatggattcggtcagaaaacgggcatcgagatcggg
gccgatgagagtgcgggactggttcctgacaatgcgtggaagatagaaaacgtcggccat
gaatggaccattggtgacaccatcaacatgtccatcggccagggatttctgcaggcaacg
ccactacaggtggcaggcatgtttgcgatcgcagctaatggcggctatcgggtcaccccc
catctcctccacgatcaggaagacaccgaagactggcgggagcctattggcctcagccct
accaccattgacatcttacagaaaggcctgcgccgggtgatcaccagcggcacggcccgg
gcgctcaacgatgccaatctgcctcccatcgctggtaagactggcaccgccgaagcccca
ccgggtaaatcccatgcctggtttggcggctatatacccgccgccgaccccgagattctg
gtagtggcctttgccgagcattccggtggcggcggtagtgccgtgaccgcgcccatggtg
aagcaagtgctagcagcctacgtcaacggccaatcgcagtaa
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