Halomicronema hongdechloris: XM38_003750
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Entry
XM38_003750 CDS
T04928
Symbol
rnc1
Name
(GenBank) Ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hhg
Halomicronema hongdechloris
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhg03019
]
XM38_003750 (rnc1)
03009 Ribosome biogenesis [BR:
hhg03009
]
XM38_003750 (rnc1)
03036 Chromosome and associated proteins [BR:
hhg03036
]
XM38_003750 (rnc1)
Enzymes [BR:
hhg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XM38_003750 (rnc1)
Messenger RNA biogenesis [BR:
hhg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XM38_003750 (rnc1)
Ribosome biogenesis [BR:
hhg03009
]
Eukaryotic type
90S particles
RNase
XM38_003750 (rnc1)
Prokaryotic type
rRNA processing factors
XM38_003750 (rnc1)
Chromosome and associated proteins [BR:
hhg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XM38_003750 (rnc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ASC69448
UniProt:
A0A1Z3HGS6
LinkDB
All DBs
Position
405648..406319
Genome browser
AA seq
223 aa
AA seq
DB search
MPSLPRFQNPALWQQAMTHSSYANESPDSGANNERLEFLGDAILTFLSGEFLFQRYPNWS
EGELTPLRAALVDQQQLGQFAQQLNLGQQLRLSRGVEGSGGRTNPRLLSSAFEALIGAYF
LDSGADMAQVRQYVVPFFESVIAERVASVQQLNPKSRLQEWALSHLGEIPRYTIVAASGP
DHAKQFVAEVRLQGTPYGRGSGHRKQEAEKEAARQALKRLQHP
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctcccccgctttcaaaacccggccctctggcaacaggccatgacccattcc
tcctatgccaacgaatctcccgacagtggagccaataacgaacggctagagttcctgggg
gatgcgattttgacctttctcagtggggaattcttgttccagcgttaccccaactggagc
gagggggaactgacgccgctgcgggcagcactagtggatcagcaacagttggggcagttt
gcccagcaattaaacctgggtcaacagctgcgcctcagtcggggagtcgagggtagcggt
ggacgcaccaatccccgcttactcagtagtgccttcgaggcgttgattggcgcctacttt
ctcgatagcggtgctgatatggcccaggtgcgtcaatatgtggtgcctttcttcgagtcg
gtgatcgccgagcgggtggcctcggtgcagcagctgaaccccaagagtcgactgcaggaa
tgggccctgagtcatctaggtgaaatcccccgatacaccattgtggcagcctccgggcct
gatcatgccaaacagttcgtggcagaagtgagactgcaaggcactccctatgggcggggc
agtggccatcgcaaacaagaggccgaaaaggaagcggctcgtcaggccttaaagcggctg
caacatccttga
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