Halomicronema hongdechloris: XM38_005440
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Entry
XM38_005440 CDS
T04928
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg00061
Fatty acid biosynthesis
hhg00071
Fatty acid degradation
hhg01100
Metabolic pathways
hhg01212
Fatty acid metabolism
hhg02024
Quorum sensing
hhg04146
Peroxisome
Module
hhg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XM38_005440
00071 Fatty acid degradation
XM38_005440
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XM38_005440
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM38_005440
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hhg01004
]
XM38_005440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhg04147
]
XM38_005440
Enzymes [BR:
hhg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XM38_005440
Lipid biosynthesis proteins [BR:
hhg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XM38_005440
Exosome [BR:
hhg04147
]
Exosomal proteins
Exosomal proteins of breast milk
XM38_005440
Exosomal proteins of breast cancer cells
XM38_005440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ASC69616
UniProt:
A0A1Z3HH46
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All DBs
Position
554765..556630
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AA seq
621 aa
AA seq
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MASSLDVALETVRRRDRVFLQQQVRYDGVQVLPQIWPLAAQRFGDTVAMRDPHGQPPATL
TYRQLCDRILTFASGLQALGVSQGTHVALFADNSHRWFIADQGIMTAGGVNAVRSAMADT
EELLYIAEHSDSTVLVVQDLALWQRLRPHLDPLPIRQGILLSDQPPPQEESLKLLSFQQL
LALGNDHSLQAVTTQPADLATLIYTSGTTGKPKGVMLTHGNLLHQINHFGAAVQPQVGDG
VLGILPSWHSFERTVEYYLYSQGCSQTYTTIRHVKTDLRQAQPQYMVGVPRLWESIYEGA
QKQFREQPPGKQRLINTFFGLSHRYVNQHWRYQDLQLDEPHLSPGQRLWAGVMAAVLWPL
HQLGKRLVYGKVRAATGGRVKQLISGGGSLARHIDVFFEIVDVPLLVGYGLTETSPVLSV
RRPWRNLRGASGQPIPQTELRVVDPDSRQDLPQGQKGLVLARGPQIMAGYYKNPEATAKV
LDPEGWFDTGDLGWLTHDYNLVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIMLV
GQDQRSLGALIVPNLEALDQWAASQGRYLQVAGKDDEVPPEMPPISLEDEAVQALFRREL
TRQVKDRPGYRPDDRIGPPSS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcccttgatgttgccctggagaccgttcgtcgtcgcgatcgcgtgttcttg
cagcaacaggtacgctacgacggcgtgcaggtgttgccccagatctggcccctggcggcc
cagcgctttggcgatacggtggccatgcgggatccccacggtcagccccccgccaccctc
acctatcggcagctgtgcgatcgcatcctcacctttgccagtggcctgcaagccctaggg
gtcagccagggaacccatgtggccctctttgccgacaacagccatcgctggtttattgcc
gaccaaggcatcatgactgccggcggcgtcaatgccgtgcgcagcgccatggccgacacc
gaggaactcctctacattgccgagcacagtgatagcactgtcttagtagtgcaagactta
gccctatggcagcggctgcggccccacttagacccactccccatccgccagggaatcttg
ctttccgatcaaccgccgccccaggaagagtccctgaagctactttccttccagcaattg
ttggccctgggcaacgaccacagcttgcaggcggtgacgacccagcccgcggatttggcc
accctaatttacacctcagggaccactggcaaacccaagggcgtcatgctcacccatggc
aacctgctgcaccagatcaaccattttggtgccgccgtgcagccccaggtaggggatggg
gtcttgggcatcttgccctcctggcatagctttgagcgcaccgtggagtattacctatat
tcccaaggctgcagtcagacctacaccacgattcgccatgtcaagaccgacctacgccag
gcgcagccgcaatatatggtgggggtgccccgactctgggagtcgatttacgagggcgcc
cagaagcaatttcgcgaacaaccccccggtaagcaacgactgatcaacacgtttttcggc
ctcagccaccgctacgtcaaccagcactggcgctatcaagatctacagctagacgaaccg
catctctccccggggcagcggctatgggcaggggtaatggcggcggtcctatggcccttg
caccaattgggtaagcgactagtttacggcaaagtgcgggcggccaccggcggtcgagtc
aagcagctgatcagcggtggtggctccctggcccgtcatatcgatgtgttcttcgagatt
gtcgatgtgcccttactggtgggctacggcctcaccgaaacctcaccagtgctgtcggtt
cgtcgtccctggcgtaatctgcgaggggcctcgggccagcctatcccccagacggaattg
agagtggttgatcccgacagtcgccaggatttgccccagggacaaaaaggcttagtgcta
gctcgtggtcctcaaatcatggccggatactacaaaaatccggaggcaacagccaaggtc
ctcgatcccgagggctggtttgacaccggcgatttgggctggttgacccacgactacaac
ctggtgctgacggggcgagccaaagataccatcgtcctcaccaatggcgaaaacatcgag
cctcaaccgattgaagatgcctgtgtccgcagcccttacattgaccagatcatgctggtg
ggtcaagatcagcgctccttaggggcattaattgtccccaatttggaggccctagaccag
tgggccgccagtcaaggccgctatctgcaggttgccggcaaggacgatgaggtgcccccc
gagatgcccccgatttccttagaggacgaagcggtgcaggctctctttcgccgtgagttg
acccgtcaggtgaaggaccggcctggctatcgccctgatgatcgaattgggcccccttcc
agctga
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